Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G1760 Aethionema arabicum HOM05D004995 ORTHO05D006034 2.0e-234 815.5 435 100.0
Aa31LG5G1780 Aethionema arabicum HOM05D004995 ORTHO05D006034 9.3e-123 444.5 484 61.0
AL6G51110 Arabidopsis lyrata HOM05D004995 ORTHO05D006034 1.1e-57 228.4 572 33.6
Thhalv10028365m.g Eutrema salsugineum HOM05D004995 ORTHO05D006034 1.1e-54 218.4 568 33.3
Sp6g02000 Schrenkiella parvula HOM05D004995 ORTHO05D006034 6.2e-50 202.6 531 35.2
CARHR250290 Cardamine hirsuta HOM05D004995 ORTHO05D006034 2.0e-48 197.6 548 32.5
AT4G02110 Arabidopsis thaliana HOM05D004995 ORTHO05D006034 2.1e-45 187.6 551 31.4
BcaB01g02426 Brassica carinata HOM05D004995 ORTHO05D006034 2.1e-45 187.6 518 35.1
BraA03t12302Z Brassica rapa HOM05D004995 ORTHO05D006034 5.1e-44 183.0 489 35.4
A03p31220 Brassica napus HOM05D004995 ORTHO05D006034 1.1e-43 181.8 488 35.2
Carub.0006s3511 Capsella rubella HOM05D004995 ORTHO05D006034 1.1e-43 181.8 542 32.3
BolC3t16092H Brassica oleracea HOM05D004995 ORTHO05D006034 2.1e-42 177.6 488 34.8
BcaC01g06775 Brassica carinata HOM05D004995 ORTHO05D006034 1.4e-41 174.9 488 36.5
C03p38070 Brassica napus HOM05D004995 ORTHO05D006034 8.4e-39 165.6 486 33.5
THA.LOC104825943 Tarenaya hassleriana HOM05D004995 ORTHO05D006034 1.1e-35 155.2 135 57.8
CANSAT25G2589 Cannabis sativa HOM05D004995 ORTHO05D006034 3.1e-33 147.1 135 51.1
ECA236G3500 Erigeron canadensis HOM05D004995 ORTHO05D006034 5.3e-33 146.4 134 52.2
COL.COLO4_23251 Corchorus olitorius HOM05D004995 ORTHO05D006034 6.9e-33 146.0 134 50.0
HanXRQChr06g0167831 Helianthus annuus HOM05D004995 ORTHO05D006034 6.9e-33 146.0 135 51.1
CiPaw.07G116000 Carya illinoinensis HOM05D004995 ORTHO05D006034 9.0e-33 145.6 133 51.1
QL12p020317 Quercus lobata HOM05D004995 ORTHO05D006034 9.0e-33 145.6 133 51.1
RcHm_v2.0_Chr7g0241761 Rosa chinensis HOM05D004995 ORTHO05D006034 9.0e-33 145.6 135 48.9
Gohir.A12G126200 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.2e-32 145.2 133 51.1
Manes.01G226600 Manihot esculenta HOM05D004995 ORTHO05D006034 1.5e-32 144.8 141 48.2
PSO357G0286 Papaver somniferum HOM05D004995 ORTHO05D006034 2.0e-32 144.4 172 44.2
Gohir.D12G129700 Gossypium hirsutum HOM05D004995 ORTHO05D006034 2.6e-32 144.1 133 50.4
Gorai.008G140900 Gossypium raimondii HOM05D004995 ORTHO05D006034 2.6e-32 144.1 133 50.4
PSO170G6821 Papaver somniferum HOM05D004995 ORTHO05D006034 2.6e-32 144.1 172 44.8
Phvul.007G215300 Phaseolus vulgaris HOM05D004995 ORTHO05D006034 3.4e-32 143.7 135 51.1
Ah.11g049350 Amaranthus hybridus HOM05D004995 ORTHO05D006034 4.4e-32 143.3 122 53.3
Ca_10292_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 4.4e-32 143.3 135 48.9
Ca_30263_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 4.4e-32 143.3 135 48.9
MELO3C015934.2 Cucumis melo HOM05D004995 ORTHO05D006034 4.4e-32 143.3 134 50.7
Glyma.10G014100 Glycine max HOM05D004995 ORTHO05D006034 4.4e-32 143.3 135 50.4
MD03G1296700 Malus domestica HOM05D004995 ORTHO05D006034 4.4e-32 143.3 135 46.7
arahy.Tifrunner.gnm1.ann1.KJ11SU Arachis hypogaea HOM05D004995 ORTHO05D006034 5.8e-32 142.9 175 44.6
FvH4_5g39450 Fragaria vesca HOM05D004995 ORTHO05D006034 5.8e-32 142.9 135 49.6
FAN18G1671 Fragaria x ananassa HOM05D004995 ORTHO05D006034 5.8e-32 142.9 135 49.6
MD11G1316200 Malus domestica HOM05D004995 ORTHO05D006034 5.8e-32 142.9 135 47.4
Lalb_Chr02g0146751 Lupinus albus HOM05D004995 ORTHO05D006034 9.9e-32 142.1 135 48.1
CsaV3_7G029870 Cucumis sativus L. HOM05D004995 ORTHO05D006034 1.3e-31 141.7 134 50.0
Eucgr.K03537 Eucalyptus grandis HOM05D004995 ORTHO05D006034 1.3e-31 141.7 135 48.1
FAN04G1561 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.3e-31 141.7 133 50.4
AUR62024673 Chenopodium quinoa HOM05D004995 ORTHO05D006034 1.7e-31 141.4 134 50.0
Lj5g0006877 Lotus japonicus HOM05D004995 ORTHO05D006034 1.7e-31 141.4 133 50.4
HanXRQChr05g0136031 Helianthus annuus HOM05D004995 ORTHO05D006034 2.2e-31 141.0 134 50.7
Ciclev10024590m.g Citrus clementina HOM05D004995 ORTHO05D006034 2.9e-31 140.6 134 47.8
HanXRQChr15g0464181 Helianthus annuus HOM05D004995 ORTHO05D006034 2.9e-31 140.6 134 50.0
Lsat_1_v5_gn_8_165441 Lactuca sativa HOM05D004995 ORTHO05D006034 2.9e-31 140.6 134 50.7
Cpa.g.sc18.23 Carica papaya HOM05D004995 ORTHO05D006034 3.8e-31 140.2 134 47.8
Dinv10081 Davidia involucrata HOM05D004995 ORTHO05D006034 3.8e-31 140.2 133 48.9
VMungo0720G1458 Vigna mungo HOM05D004995 ORTHO05D006034 3.8e-31 140.2 135 49.6
Oeu008461.1 Olea europaea HOM05D004995 ORTHO05D006034 4.9e-31 139.8 134 48.5
Actinidia25841 Actinidia chinensis HOM05D004995 ORTHO05D006034 6.4e-31 139.4 133 48.9
Glyma.02G013500 Glycine max HOM05D004995 ORTHO05D006034 6.4e-31 139.4 135 48.9
Medtr1g087290 Medicago truncatula HOM05D004995 ORTHO05D006034 6.4e-31 139.4 135 48.9
Sabra14G0090800 Salix brachista HOM05D004995 ORTHO05D006034 6.4e-31 139.4 134 47.0
CSS0012776 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.4e-30 138.3 133 48.1
CSS0035665 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.4e-30 138.3 133 48.1
EL10As5g23507 Beta vulgaris HOM05D004995 ORTHO05D006034 1.9e-30 137.9 122 50.8
AUR62011830 Chenopodium quinoa HOM05D004995 ORTHO05D006034 1.9e-30 137.9 134 48.5
DCAR_012367 Daucus carota HOM05D004995 ORTHO05D006034 1.9e-30 137.9 121 52.9
Psat6g162360 Pisum sativum HOM05D004995 ORTHO05D006034 1.9e-30 137.9 135 48.9
FAN13G2181 Fragaria x ananassa HOM05D004995 ORTHO05D006034 2.4e-30 137.5 133 49.6
Lj1A19G23 Lonicera japonica HOM05D004995 ORTHO05D006034 3.2e-30 137.1 120 50.8
Hund09619 Selenicereus undatus HOM05D004995 ORTHO05D006034 3.2e-30 137.1 135 45.9
Prupe.8G270500 Prunus persica HOM05D004995 ORTHO05D006034 4.2e-30 136.7 135 45.9
Sed0026389 Sechium edule HOM05D004995 ORTHO05D006034 4.2e-30 136.7 155 45.2
TPR.G19766 Trifolium pratense HOM05D004995 ORTHO05D006034 4.2e-30 136.7 135 47.4
vmacro15117 Vaccinium macrocarpon HOM05D004995 ORTHO05D006034 4.2e-30 136.7 133 47.4
DCAR_005771 Daucus carota HOM05D004995 ORTHO05D006034 5.4e-30 136.3 121 52.1
GSVIVG01028102001 Vitis vinifera HOM05D004995 ORTHO05D006034 5.4e-30 136.3 133 46.6
Duzib138G1673 Durio zibethinus HOM05D004995 ORTHO05D006034 7.1e-30 136.0 121 49.6
Potri.014G122400 Populus trichocarpa HOM05D004995 ORTHO05D006034 7.1e-30 136.0 134 45.5
Cfa005817 Carpinus fangiana HOM05D004995 ORTHO05D006034 9.3e-30 135.6 133 46.6
SGA_v2.0_scaffold376G50269 Striga asiatica HOM05D004995 ORTHO05D006034 1.6e-29 134.8 132 48.5
Thecc.01G311300 Theobroma cacao HOM05D004995 ORTHO05D006034 1.6e-29 134.8 119 49.6
Cc02_g27310 Coffea canephora HOM05D004995 ORTHO05D006034 2.1e-29 134.4 119 50.4
Rhsim01G0290000 Rhododendron simsii HOM05D004995 ORTHO05D006034 2.1e-29 134.4 133 45.9
Dinv33107 Davidia involucrata HOM05D004995 ORTHO05D006034 2.7e-29 134.0 133 48.1
TWI75G0138 Tripterygium wilfordii HOM05D004995 ORTHO05D006034 2.7e-29 134.0 133 48.9
MBI18_g28452_MAGBIO Magnolia biondii HOM05D004995 ORTHO05D006034 6.0e-29 132.9 133 48.1
Oeu047387.1 Olea europaea HOM05D004995 ORTHO05D006034 6.0e-29 132.9 132 46.2
Atru.chr5.1036 Acer truncatum HOM05D004995 ORTHO05D006034 7.9e-29 132.5 133 46.6
Actinidia21007 Actinidia chinensis HOM05D004995 ORTHO05D006034 7.9e-29 132.5 133 47.4
Nn3g21651 Nelumbo nucifera HOM05D004995 ORTHO05D006034 1.0e-28 132.1 133 45.1
Migut.D00092 Erythranthe guttata HOM05D004995 ORTHO05D006034 1.3e-28 131.7 132 47.0
Aqoxy5G04290 Aquilegia oxysepala HOM05D004995 ORTHO05D006034 1.7e-28 131.3 133 46.6
Potri.002G197400 Populus trichocarpa HOM05D004995 ORTHO05D006034 2.3e-28 131.0 134 44.8
SHI20082 Sapria himalayana HOM05D004995 ORTHO05D006034 2.3e-28 131.0 140 46.4
unitig_90.g27435 Utricularia gibba HOM05D004995 ORTHO05D006034 3.9e-28 130.2 134 45.5
ATR0706G147 Amborella trichopoda HOM05D004995 ORTHO05D006034 6.6e-28 129.4 134 45.5
PGR044G2031 Punica granatum HOM05D004995 ORTHO05D006034 3.3e-27 127.1 145 44.1
Solyc06g009680.4 Solanum lycopersicum HOM05D004995 ORTHO05D006034 3.3e-27 127.1 135 45.9
Nitab4.5_0006144g0040 Nicotiana tabacum HOM05D004995 ORTHO05D006034 4.3e-27 126.7 135 45.9
Sopen06g004320 Solanum pennellii HOM05D004995 ORTHO05D006034 4.3e-27 126.7 135 45.9
CAN.G1280.22 Capsicum annuum HOM05D004995 ORTHO05D006034 7.3e-27 125.9 135 45.9
CAN.G362.42 Capsicum annuum HOM05D004995 ORTHO05D006034 7.3e-27 125.9 138 43.5
CDE09G0507 Ceratophyllum demersum HOM05D004995 ORTHO05D006034 7.3e-27 125.9 132 47.7
Peaxi162Scf00058g03010 Petunia axillaris HOM05D004995 ORTHO05D006034 1.3e-26 125.2 135 45.2
Nitab4.5_0000363g0330 Nicotiana tabacum HOM05D004995 ORTHO05D006034 2.1e-26 124.4 135 45.2
Peaxi162Scf00001g10213 Petunia axillaris HOM05D004995 ORTHO05D006034 2.1e-26 124.4 134 43.3
PGSC0003DMG400009006 Solanum tuberosum HOM05D004995 ORTHO05D006034 2.1e-26 124.4 132 46.2
Sabra02G0160100 Salix brachista HOM05D004995 ORTHO05D006034 2.8e-26 124.0 134 44.0
Sc24g0003210 Simmondsia chinensis HOM05D004995 ORTHO05D006034 3.6e-26 123.6 134 46.3
SEGI_38340 Sequoiadendron giganteum HOM05D004995 ORTHO05D006034 2.4e-25 120.9 267 33.3
Nitab4.5_0001301g0150 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.5e-24 118.2 172 37.8
Zm00001eb014460 Zea mays HOM05D004995 ORTHO05D006034 4.5e-24 116.7 134 44.0
Os03g0304400 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 5.8e-24 116.3 175 38.9
Nitab4.5_0013957g0010 Nicotiana tabacum HOM05D004995 ORTHO05D006034 7.6e-24 115.9 172 36.6
Haze_05021 Corylus avellana HOM05D004995 ORTHO05D006034 1.4e-22 111.7 133 42.9
Haze_05025 Corylus avellana HOM05D004995 ORTHO05D006034 1.4e-22 111.7 133 42.9
HPP92_002052 Vanilla planifolia HOM05D004995 ORTHO05D006034 1.2e-21 108.6 74 63.5
FAN08G3258 Fragaria x ananassa HOM05D004995 ORTHO05D006034 6.9e-17 92.8 110 43.6
SMO367G0571 Selaginella moellendorffii HOM05D004995 ORTHO05D006034 2.5e-14 84.3 144 31.2
AagrBONN_evm.TU.Sc2ySwM_368.2357 Anthoceros agrestis HOM05D004995 ORTHO05D006034 7.1e-14 82.8 114 39.5
Mapoly0010s0152 Marchantia polymorpha HOM05D004995 ORTHO05D006034 1.2e-13 82.0 110 37.3
CBR_g29774 Chara braunii HOM05D004995 ORTHO05D006034 7.4e-11 72.8 129 33.3
TAR633G1331 Trochodendron aralioides HOM05D004995 ORTHO05D006034 2.8e-10 70.9 50 62.0
Zm00001eb309400 Zea mays HOM05D004995 ORTHO05D006034 7.6e-08 62.8 69 44.9
Zm00001eb333180 Zea mays HOM05D004995 ORTHO05D006034 2.2e-07 61.2 69 43.5
MD11G1316300 Malus domestica HOM05D004995 ORTHO05D006034 1.1e-06 58.9 50 60.0


User provided reference genes

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