Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 5.2e-154 547.7 288 100.0
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 3.8e-64 249.2 274 60.9
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 3.7e-59 232.6 259 56.8
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 2.9e-56 223.0 282 52.5
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 4.7e-54 215.7 272 52.6
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 4.4e-52 209.1 276 52.5
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 6.5e-48 195.3 271 50.6
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 3.6e-46 189.5 271 48.3
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 3.6e-46 189.5 251 48.6
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.0e-41 173.7 272 44.9
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 2.7e-41 173.3 272 44.9
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 8.5e-40 168.3 278 44.6
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 1.5e-39 167.5 277 43.0
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 7.2e-39 165.2 288 43.8
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 4.7e-38 162.5 273 45.1
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 4.7e-38 162.5 273 45.1
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 1.4e-37 161.0 260 41.2
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 6.8e-37 158.7 290 42.8
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 3.4e-36 156.4 262 40.5
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 3.4e-36 156.4 273 45.1
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 3.4e-36 156.4 289 41.2
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 3.4e-36 156.4 274 42.3
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 4.4e-36 156.0 299 40.5
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 5.7e-36 155.6 274 40.5
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 7.5e-36 155.2 262 40.8
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 2.2e-35 153.7 263 43.0
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.2e-35 153.7 287 40.8
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 2.2e-35 153.7 324 37.3
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 2.2e-35 153.7 285 40.4
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 2.8e-35 153.3 249 42.6
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 6.3e-35 152.1 283 39.9
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 1.1e-34 151.4 260 43.5
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 1.4e-34 151.0 259 39.0
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 5.4e-34 149.1 263 40.3
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.2e-33 147.9 300 38.7
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.2e-33 147.9 298 38.9
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 2.3e-32 143.7 308 36.7
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 6.6e-32 142.1 285 38.6
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 6.6e-32 142.1 259 40.2
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 8.6e-32 141.7 320 37.8
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 1.1e-31 141.4 249 40.2
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 2.5e-31 140.2 272 39.7
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 3.3e-31 139.8 292 38.7
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 4.3e-31 139.4 254 37.8
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 2.1e-30 137.1 272 39.3
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 3.6e-30 136.3 299 36.5
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 4.7e-30 136.0 271 39.5
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 6.1e-30 135.6 308 37.3
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.8e-29 134.0 278 37.4
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 5.2e-29 132.5 291 36.8
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 5.2e-29 132.5 292 38.0
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 6.8e-29 132.1 278 37.1
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 2.0e-28 130.6 249 41.4
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 2.6e-28 130.2 278 37.4
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 7.5e-28 128.6 294 35.4
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.3e-27 127.9 285 37.5
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 1.3e-27 127.9 270 35.9
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 3.7e-27 126.3 267 37.1
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 3.7e-27 126.3 297 35.4
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 4.9e-27 125.9 261 38.3
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 8.3e-27 125.2 280 35.7
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 2.4e-26 123.6 270 38.5
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 3.2e-26 123.2 300 34.3
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 7.0e-26 122.1 275 36.4
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 4.6e-25 119.4 300 35.0
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 5.9e-25 119.0 282 37.2
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.3e-24 117.9 285 37.5
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.7e-24 117.5 304 35.9
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 2.3e-24 117.1 299 34.4
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 3.0e-24 116.7 278 35.6
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 3.9e-24 116.3 166 43.4
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 3.9e-24 116.3 247 35.6
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 5.0e-24 115.9 247 36.0
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 1.1e-23 114.8 275 36.7
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 1.5e-23 114.4 288 37.5
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.5e-23 114.4 148 44.6
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 4.3e-23 112.8 271 38.0
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 5.6e-23 112.5 200 39.5
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 1.6e-22 110.9 290 32.1
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 2.1e-22 110.5 318 31.8
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 2.8e-22 110.2 287 33.8
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 8.0e-22 108.6 318 32.1
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 1.0e-21 108.2 300 32.7
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.8e-21 107.5 283 35.7
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 3.4e-20 103.2 140 42.9
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 3.4e-20 103.2 275 34.2
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 3.4e-20 103.2 73 63.0
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 5.8e-20 102.4 260 34.2
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.7e-19 100.9 283 34.6
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.7e-19 99.8 197 37.1
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.6e-17 94.4 262 33.2
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.7e-17 93.6 381 28.1
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 3.5e-17 93.2 304 31.6
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 6.0e-17 92.4 342 31.6
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 7.8e-17 92.0 196 40.3
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 7.8e-17 92.0 310 29.7
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 3.0e-16 90.1 299 32.8
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 3.0e-16 90.1 297 30.3
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 1.1e-15 88.2 58 69.0
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 8.1e-14 82.0 137 36.5
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.8e-13 80.9 297 24.9
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.2e-12 78.2 108 46.3
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 1.2e-12 78.2 120 36.7
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 2.2e-11 73.9 130 40.0
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 3.7e-11 73.2 134 39.6
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.4e-10 71.2 58 51.7
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 7.8e-09 65.5 183 30.1


User provided reference genes

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