Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.1e-224 783.1 427 100.0
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 4.9e-177 624.8 427 80.3
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 7.7e-170 600.9 429 80.9
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.7e-167 592.4 428 77.8
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 4.1e-163 578.6 431 75.9
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.7e-161 573.2 430 76.7
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 8.5e-161 570.9 428 78.0
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.7e-159 565.8 428 76.4
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 1.1e-155 553.9 427 72.6
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.6e-154 549.3 428 74.5
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.4e-147 526.2 427 72.1
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 9.1e-147 524.2 427 71.9
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.8e-142 510.0 427 70.3
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 9.7e-141 504.2 430 69.1
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.1e-128 464.2 435 60.9
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 1.2e-127 460.7 425 61.2
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.1e-127 459.9 439 59.7
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.8e-126 456.8 438 59.8
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.2e-125 454.1 436 60.6
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.6e-125 453.0 406 63.1
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 2.6e-125 453.0 440 58.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 4.4e-125 452.2 426 61.0
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.3e-124 450.7 440 59.1
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 3.7e-124 449.1 435 59.8
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 2.4e-123 446.4 352 67.9
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.4e-123 446.4 432 60.2
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.2e-122 444.1 431 59.2
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.7e-122 443.0 429 59.4
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.7e-122 443.0 425 59.3
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 7.8e-122 441.4 437 59.7
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 2.3e-121 439.9 436 58.7
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 3.8e-121 439.1 428 57.7
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.9e-120 436.8 426 57.7
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 4.3e-120 435.6 435 58.4
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 2.8e-119 433.0 452 54.9
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 3.6e-119 432.6 349 63.6
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 6.1e-119 431.8 387 61.8
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 6.1e-119 431.8 384 62.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 8.0e-119 431.4 444 55.2
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.2e-117 427.6 435 58.6
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 2.0e-117 426.8 429 57.3
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 3.4e-117 426.0 436 58.0
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 4.4e-117 425.6 442 57.7
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 5.8e-117 425.2 432 57.4
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 7.5e-117 424.9 391 60.9
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 9.8e-117 424.5 391 61.4
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 2.2e-116 423.3 435 60.7
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 2.9e-116 422.9 431 56.6
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 3.7e-116 422.5 427 56.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 3.7e-116 422.5 428 57.0
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 4.9e-116 422.2 427 56.9
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.4e-115 420.6 434 56.7
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.9e-115 420.2 338 66.9
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.9e-115 420.2 429 56.2
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.6e-114 417.2 425 56.2
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.0e-114 416.8 445 56.4
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.0e-114 416.8 439 58.3
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.0e-114 416.8 439 56.9
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-114 416.4 439 56.9
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.7e-114 416.4 438 56.8
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.7e-114 416.4 430 59.3
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 3.5e-114 416.0 340 65.9
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 4.6e-114 415.6 384 60.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.8e-114 414.8 438 56.4
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 7.8e-114 414.8 434 56.2
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.3e-113 414.1 436 55.5
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 5.0e-113 412.1 435 54.7
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.3e-112 409.5 440 54.5
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 7.3e-112 408.3 430 57.2
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 9.5e-112 407.9 440 54.5
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.1e-111 406.8 431 54.8
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.7e-111 405.6 443 53.7
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 8.0e-111 404.8 430 54.7
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 1.1e-110 404.4 431 55.5
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.4e-110 404.1 443 53.5
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 3.1e-110 402.9 551 47.4
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 7.5e-109 398.3 432 54.4
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 9.8e-109 397.9 440 56.4
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.3e-108 397.5 353 62.0
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 4.9e-108 395.6 439 56.0
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 4.9e-108 395.6 435 53.8
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.4e-108 395.2 439 55.8
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.4e-107 393.3 435 53.6
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 9.2e-107 391.3 378 58.2
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 2.7e-106 389.8 428 53.5
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 2.7e-106 389.8 337 63.2
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 4.6e-106 389.0 434 53.9
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.0e-106 388.7 467 50.5
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 5.1e-105 385.6 446 50.7
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.5e-104 384.0 429 54.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 9.5e-104 381.3 433 54.3
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 3.6e-103 379.4 336 61.9
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 4.7e-103 379.0 428 51.9
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.8e-102 377.1 424 54.2
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 3.1e-102 376.3 429 53.6
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 1.1e-96 357.8 347 57.1
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 8.9e-94 348.2 433 51.3
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 4.2e-91 339.3 339 52.8
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 3.0e-89 333.2 446 47.1
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 6.6e-89 332.0 329 57.8
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 6.4e-84 315.5 318 57.5
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 1.9e-83 313.9 346 55.5
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-79 300.8 272 61.0
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 5.1e-73 279.3 425 41.2
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 6.7e-73 278.9 271 55.0
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.5e-72 277.7 346 46.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 2.4e-70 270.4 347 51.0
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 5.8e-69 265.8 336 46.7
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.7e-60 237.7 323 45.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 2.8e-55 220.3 215 55.8
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.5e-53 214.5 364 37.6
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.4e-43 181.4 125 74.4
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 3.2e-43 180.3 214 50.0
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 5.7e-40 169.5 126 68.3
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.4e-33 148.3 88 76.1
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.8e-25 121.3 404 26.2
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 8.8e-25 119.0 78 78.2
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 3.1e-22 110.5 194 40.2
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.0e-20 105.5 314 27.7
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 3.4e-16 90.5 205 35.6
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 4.9e-15 86.7 52 75.0
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.1e-14 85.5 46 87.0
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.8e-14 84.7 46 84.8
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.8e-12 77.0 333 25.2
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 8.6e-12 75.9 169 38.5


User provided reference genes

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