Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1464.9 742 100.0
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1181.8 743 81.4
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1174.1 746 81.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1170.6 744 81.2
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1167.1 743 80.9
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1161.7 743 80.9
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1161.0 744 80.8
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1158.3 743 80.8
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1155.6 743 80.1
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1150.2 748 80.6
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1149.8 745 80.3
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1149.0 745 80.1
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1149.0 745 80.1
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1147.1 744 80.4
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1144.8 743 80.3
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1133.6 744 80.0
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1126.7 751 78.8
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1103.6 746 78.4
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 5.0e-310 1067.4 746 73.2
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 2.7e-303 1045.0 739 75.5
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 4.1e-272 941.4 765 64.4
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 2.1e-271 939.1 764 64.4
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 2.7e-271 938.7 764 64.3
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 7.3e-269 930.6 761 63.2
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.6e-268 929.5 766 63.7
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.1e-263 912.5 764 62.4
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 5.1e-262 907.9 761 61.4
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 6.6e-262 907.5 763 62.3
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 2.1e-260 902.5 765 61.4
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 6.2e-260 901.0 760 61.8
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 2.4e-259 899.0 764 61.6
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 1.7e-257 892.9 760 61.4
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 3.8e-257 891.7 779 60.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 4.9e-257 891.3 680 67.4
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 1.6e-255 886.3 754 59.9
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 2.1e-255 885.9 764 60.5
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.0e-254 883.6 759 61.5
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 1.0e-254 883.6 755 60.4
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 1.5e-253 879.8 761 60.4
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 1.9e-253 879.4 765 60.5
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 2.8e-252 875.5 761 60.4
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 4.8e-252 874.8 750 60.8
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 1.8e-251 872.8 761 59.9
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 1.8e-251 872.8 763 60.0
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 3.8e-249 865.1 763 58.7
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 3.8e-249 865.1 758 60.8
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 2.4e-248 862.4 758 60.6
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 1.2e-247 860.1 547 79.7
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 6.0e-247 857.8 769 60.3
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 3.9e-246 855.1 762 58.3
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 6.7e-246 854.4 793 57.0
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 3.3e-245 852.0 766 59.7
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.3e-245 852.0 768 58.1
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 5.6e-245 851.3 783 58.5
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 2.1e-244 849.4 763 59.9
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.1e-243 847.0 761 58.3
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 1.8e-243 846.3 762 57.7
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 4.0e-243 845.1 761 59.7
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 4.0e-243 845.1 766 58.0
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 3.4e-242 842.0 758 59.0
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.0e-241 840.5 748 59.1
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 1.0e-241 840.5 764 58.6
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 3.8e-241 838.6 758 58.3
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.5e-240 835.9 792 56.2
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 5.5e-240 834.7 623 68.2
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 1.6e-239 833.2 764 58.1
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.1e-239 832.8 789 56.0
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 3.5e-239 832.0 743 60.0
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.3e-238 830.1 766 58.0
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.3e-238 830.1 763 57.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-238 830.1 790 55.7
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.8e-238 829.7 767 58.7
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 5.1e-238 828.2 765 57.5
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 3.3e-237 825.5 849 54.7
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 6.9e-235 817.8 751 58.2
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 1.5e-234 816.6 788 57.0
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 5.5e-232 808.1 689 61.7
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 2.7e-231 805.8 694 61.2
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.1e-229 800.4 761 56.4
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 1.5e-229 800.0 750 57.6
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.5e-229 799.3 778 56.0
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 5.7e-229 798.1 779 56.5
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 1.7e-228 796.6 818 53.7
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.7e-228 796.6 784 55.0
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.4e-227 793.5 673 62.3
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 1.2e-226 790.4 672 61.6
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 1.8e-222 776.5 841 51.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 5.1e-222 775.0 665 61.1
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 1.8e-219 766.5 697 59.0
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 9.4e-216 754.2 762 54.3
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 1.1e-211 740.7 671 56.9
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 7.0e-211 738.0 760 53.4
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 1.6e-210 736.9 779 52.8
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 5.2e-206 721.8 666 57.5
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 3.3e-205 719.2 771 52.4
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 1.7e-201 706.8 759 51.0
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 2.9e-201 706.1 826 50.1
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 1.0e-198 697.6 586 64.2
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 5.2e-198 695.3 657 56.0
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.4e-195 687.2 761 51.0
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 7.7e-194 681.4 754 50.3
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 6.8e-190 668.3 764 50.7
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 8.6e-185 651.4 750 49.1
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 4.1e-179 632.5 638 54.7
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 3.5e-178 629.4 627 55.2
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 4.1e-171 605.9 761 46.3
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 8.9e-166 588.2 798 44.4
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 5.4e-163 578.9 765 45.6
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 8.6e-161 571.6 603 52.4
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 2.8e-159 566.6 638 50.6
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 6.4e-156 555.4 926 39.3
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 1.7e-153 547.4 610 50.5
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 1.1e-150 538.1 642 48.3
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 2.2e-148 530.4 561 52.8
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 6.2e-143 512.3 651 48.4
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 8.1e-135 485.3 533 51.2
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.5e-125 453.0 411 57.2
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 5.7e-112 409.5 400 52.8
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 8.3e-87 325.9 338 52.1
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 8.5e-84 315.8 646 33.6
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 2.0e-72 278.1 538 35.1
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 6.3e-71 273.1 254 55.5
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.6e-61 241.9 381 40.4
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.7e-52 211.8 259 44.4
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.0e-52 211.1 231 47.6
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 7.1e-46 189.9 585 31.1
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 4.6e-45 187.2 176 59.1
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 3.4e-40 171.0 162 54.9
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.8e-40 170.2 165 54.5
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 4.2e-38 164.1 167 58.7
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.6e-34 152.1 185 43.8
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 2.9e-31 141.4 92 77.2
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 2.4e-30 138.3 92 75.0
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 7.9e-29 133.3 92 72.8
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 7.9e-21 106.7 174 40.2
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 3.0e-20 104.8 71 77.5
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 7.4e-19 100.1 199 39.7
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 1.3e-15 89.4 103 41.7
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.1e-14 86.3 62 62.9
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 3.0e-12 78.2 65 64.6
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 3.0e-12 78.2 65 64.6
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 6.7e-12 77.0 65 60.0
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 5.7e-11 73.9 78 47.4
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 3.1e-09 68.2 93 43.0
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 5.9e-08 63.9 56 57.1


User provided reference genes

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