Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G13910 Aethionema arabicum HOM05D000135 ORTHO05D011359 2.1e-31 139.4 142 100.0
AT5G17470 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 5.4e-11 71.6 75 48.0
AL6G28550 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 9.2e-11 70.9 75 49.3
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 9.2e-11 70.9 74 48.6
AL4G32280 Arabidopsis lyrata HOM05D000135 ORTHO05D011359 1.6e-10 70.1 75 50.7
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 2.0e-10 69.7 77 44.2
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 2.7e-10 69.3 77 42.9
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 5.9e-10 68.2 77 42.9
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 1.3e-09 67.0 66 47.0
A03p01440 Brassica napus HOM05D000135 ORTHO05D000203 1.7e-09 66.6 62 53.2
AT2G36180 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 2.3e-09 66.2 139 34.5
BcaB01g05778 Brassica carinata HOM05D000135 ORTHO05D000203 2.9e-09 65.9 74 45.9
C03p01770 Brassica napus HOM05D000135 ORTHO05D000203 2.9e-09 65.9 74 45.9
BolC3t12732H Brassica oleracea HOM05D000135 ORTHO05D000203 2.9e-09 65.9 74 45.9
CARHR195730 Cardamine hirsuta HOM05D000135 ORTHO05D000203 2.9e-09 65.9 75 44.0
BraA03t09523Z Brassica rapa HOM05D000135 ORTHO05D000203 3.8e-09 65.5 62 51.6
Carub.0004s0480 Capsella rubella HOM05D000135 ORTHO05D000203 5.0e-09 65.1 75 42.7
AT3G03400 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 1.1e-08 63.9 77 40.3
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 3.3e-08 62.4 65 49.2
Carub.0006s1570 Capsella rubella HOM05D000135 ORTHO05D011359 9.5e-08 60.8 75 41.3
BcaB01g05781 Brassica carinata HOM05D000135 ORTHO05D000203 1.6e-07 60.1 62 50.0
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 1.6e-07 60.1 65 46.2
BcaC09g47744 Brassica carinata HOM05D000135 ORTHO05D011359 2.8e-07 59.3 68 41.2
BNapus_Darmor_BZH_scaffold_162p00140 Brassica napus HOM05D000135 ORTHO05D011359 2.8e-07 59.3 68 41.2
BolC1t05833H Brassica oleracea HOM05D000135 ORTHO05D011359 2.8e-07 59.3 68 41.2
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 4.7e-07 58.5 65 44.6
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 6.1e-07 58.2 65 43.1
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 1.0e-06 57.4 63 47.6
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 1.0e-06 57.4 63 47.6
Thhalv10015440m.g Eutrema salsugineum HOM05D017453 ORTHO05D018582 1.4e-06 57.0 40 65.0
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 2.3e-06 56.2 65 47.7
Thhalv10003096m.g Eutrema salsugineum HOM05D017453 ORTHO05D018582 3.0e-06 55.8 40 62.5
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 4.0e-06 55.5 63 46.0
BraA03t12154Z Brassica rapa HOM05D017453 ORTHO05D018582 4.0e-06 55.5 56 46.4
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 4.0e-06 55.5 63 46.0
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 4.0e-06 55.5 65 44.6


User provided reference genes

Program Settings