Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 6.1e-124 447.6 239 100.0
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.1e-76 289.7 229 70.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.0e-75 287.3 229 69.9
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 2.6e-74 282.7 238 68.1
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 7.5e-74 281.2 238 68.1
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.1e-72 277.3 239 65.7
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.4e-72 276.2 220 69.5
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.6e-71 271.9 223 68.2
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.1e-69 267.3 267 60.7
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.5e-69 266.2 266 60.9
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.7e-65 252.3 237 59.1
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.9e-64 250.0 240 57.9
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.4e-64 249.6 229 59.0
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 7.8e-63 244.6 238 58.8
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 1.3e-62 243.8 237 57.8
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 3.9e-62 242.3 237 57.8
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.0e-62 241.9 236 58.9
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 5.0e-62 241.9 238 58.4
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.2e-60 237.3 197 69.0
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 2.8e-60 236.1 232 58.6
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 3.6e-60 235.7 231 57.1
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.8e-59 233.4 237 55.7
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 4.4e-58 228.8 236 56.4
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 5.2e-51 205.3 222 52.3
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.2e-51 205.3 227 51.5
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 8.9e-51 204.5 221 53.4
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.2e-50 204.1 222 51.4
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 5.8e-50 201.8 222 50.0
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 7.6e-50 201.4 231 48.9
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 3.2e-48 196.1 215 51.6
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.2e-48 196.1 222 51.4
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 5.4e-48 195.3 216 50.9
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 7.1e-48 194.9 222 50.5
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 1.6e-47 193.7 227 50.2
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 2.1e-47 193.4 221 50.7
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 7.8e-47 191.4 226 47.8
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 7.8e-47 191.4 216 47.2
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.7e-46 190.3 226 48.7
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 2.3e-46 189.9 216 49.5
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 2.3e-46 189.9 221 48.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 4.3e-45 185.7 217 48.8
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 4.3e-45 185.7 220 48.6
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 7.3e-45 184.9 217 48.4
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 1.2e-44 184.1 218 48.2
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 1.6e-44 183.7 219 48.4
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.8e-43 180.3 220 49.1
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 2.4e-43 179.9 223 46.6
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 2.4e-43 179.9 223 46.6
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 4.0e-43 179.1 216 48.1
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 4.0e-43 179.1 218 47.7
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 9.0e-43 177.9 224 46.9
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 9.0e-43 177.9 218 48.6
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.2e-42 177.6 228 46.9
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.2e-42 177.6 219 46.6
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.5e-42 177.2 216 46.8
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.0e-42 176.8 219 46.1
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.8e-42 175.3 220 48.2
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 9.9e-42 174.5 323 36.8
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.3e-41 174.1 220 48.2
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 2.2e-41 173.3 220 46.4
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 2.2e-41 173.3 220 45.9
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 4.9e-41 172.2 202 49.0
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 4.9e-41 172.2 194 49.5
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 6.4e-41 171.8 220 47.3
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.4e-41 171.4 230 45.2
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.4e-40 169.9 233 44.6
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.2e-40 169.5 226 46.9
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 4.2e-40 169.1 223 45.3
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 7.1e-40 168.3 219 44.7
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 9.3e-40 167.9 220 44.1
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 9.3e-40 167.9 220 44.1
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.6e-39 167.2 223 43.9
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.6e-39 167.2 221 43.9
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 2.7e-39 166.4 220 43.6
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 4.6e-39 165.6 220 45.5
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 4.6e-39 165.6 220 43.6
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.0e-38 164.5 213 41.3
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.3e-38 164.1 217 41.9
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.7e-38 163.7 191 54.5
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 1.7e-38 163.7 300 38.0
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.7e-38 163.7 207 47.8
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 3.0e-38 162.9 213 42.3
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 3.0e-38 162.9 222 43.7
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 8.7e-38 161.4 214 43.5
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 3.3e-37 159.5 233 41.2
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 9.6e-37 157.9 228 41.7
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.4e-35 154.1 217 42.9
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 3.4e-34 149.4 168 50.6
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 9.9e-34 147.9 302 37.1
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.4e-32 144.1 198 43.4
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.2e-32 142.5 220 40.0
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.2e-31 141.0 219 38.8
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 7.9e-31 138.3 191 44.5
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 3.0e-30 136.3 196 40.3
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 4.3e-29 132.5 183 42.1
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.8e-28 129.8 226 39.4
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 5.3e-27 125.6 138 48.6
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 6.9e-27 125.2 205 40.5
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.5e-26 124.0 179 46.4
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.0e-26 123.6 248 37.1
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.6e-26 123.2 217 39.2
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 2.2e-25 120.2 194 37.1
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 1.9e-24 117.1 156 43.6
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.2e-23 114.4 202 36.1
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.6e-23 114.0 67 67.2
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.1e-23 113.6 67 67.2
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 3.5e-23 112.8 212 33.0
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 7.9e-23 111.7 194 39.2
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 6.7e-22 108.6 79 55.7
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 1.5e-21 107.5 206 36.4
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.9e-21 107.1 217 36.4
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 9.6e-21 104.8 276 30.4
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 2.1e-20 103.6 228 33.3
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 8.2e-20 101.7 115 53.9
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 6.5e-17 92.0 136 41.2
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 7.9e-15 85.1 134 43.3
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 5.1e-14 82.4 248 30.6
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.7e-12 76.3 72 55.6
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 4.8e-12 75.9 135 37.0
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 4.8e-12 75.9 134 38.1
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.1e-11 74.7 132 42.4
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 4.1e-11 72.8 186 30.6
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 5.3e-11 72.4 85 57.6
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.0e-09 68.2 158 32.9
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 6.7e-06 55.5 58 50.0


User provided reference genes

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