Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 4.0e-87 324.7 161 100.0
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 4.7e-64 248.1 186 73.7
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 2.4e-63 245.7 185 72.4
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 3.1e-63 245.4 185 72.4
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 9.9e-62 240.4 186 71.0
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 9.9e-62 240.4 186 70.4
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 1.3e-61 240.0 184 71.2
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 1.3e-61 240.0 184 71.2
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 2.2e-61 239.2 186 70.4
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 2.9e-61 238.8 189 69.3
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 8.4e-61 237.3 186 70.4
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 1.9e-60 236.1 223 60.5
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 2.4e-60 235.7 197 66.5
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.6e-59 233.0 200 65.0
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 3.3e-57 225.3 189 67.7
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 2.2e-53 212.6 189 63.0
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 1.0e-50 203.8 164 68.9
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 1.8e-50 203.0 140 77.9
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 9.9e-46 187.2 137 73.7
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.4e-44 183.3 188 55.3
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.4e-44 183.3 188 55.3
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 4.2e-44 181.8 185 51.9
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 5.5e-44 181.4 187 53.5
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 5.5e-44 181.4 184 54.3
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 7.1e-44 181.0 184 54.9
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 2.1e-43 179.5 183 54.1
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 3.5e-43 178.7 186 52.7
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 7.9e-43 177.6 183 54.6
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.3e-42 176.8 183 54.6
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 2.3e-42 176.0 181 53.6
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 3.9e-42 175.3 183 53.6
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 6.7e-42 174.5 184 51.1
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.5e-41 172.6 181 53.0
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 4.3e-41 171.8 183 52.5
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 5.6e-41 171.4 193 51.3
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 7.4e-41 171.0 183 52.5
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 7.4e-41 171.0 190 55.8
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 9.6e-41 170.6 184 55.4
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 9.6e-41 170.6 183 49.7
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 2.1e-40 169.5 184 49.5
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 3.7e-40 168.7 184 50.0
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 3.7e-40 168.7 183 51.9
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 3.7e-40 168.7 184 52.7
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 4.8e-40 168.3 186 51.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 8.2e-40 167.5 188 51.6
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 8.2e-40 167.5 184 50.0
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 1.1e-39 167.2 193 51.3
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 1.4e-39 166.8 183 48.6
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 2.4e-39 166.0 184 49.5
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.4e-39 166.0 184 48.4
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 3.1e-39 165.6 184 48.9
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 3.1e-39 165.6 184 51.1
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 3.1e-39 165.6 184 48.9
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 4.0e-39 165.2 186 49.5
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 5.3e-39 164.9 188 49.5
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 9.0e-39 164.1 184 50.5
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 1.2e-38 163.7 173 53.8
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 1.2e-38 163.7 185 51.4
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 4.5e-38 161.8 189 49.7
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 5.8e-38 161.4 190 48.9
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.8e-38 161.4 184 48.9
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 1.3e-37 160.2 183 48.6
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.3e-37 160.2 183 48.6
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.7e-37 159.8 185 49.2
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.7e-37 159.8 183 48.6
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 2.2e-37 159.5 185 49.2
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 8.4e-37 157.5 188 48.9
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 3.2e-36 155.6 185 48.6
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 9.3e-36 154.1 133 60.9
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 9.3e-36 154.1 184 47.8
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 1.2e-35 153.7 185 47.6
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 1.6e-35 153.3 186 47.3
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 2.7e-35 152.5 189 48.1
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 3.5e-35 152.1 133 60.2
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.3e-34 150.2 137 59.1
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.8e-34 149.8 184 46.2
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.1e-34 148.3 185 48.6
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 8.7e-34 147.5 188 47.3
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 8.7e-34 147.5 132 58.3
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 1.9e-33 146.4 175 50.3
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 4.3e-33 145.2 230 41.3
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 5.7e-33 144.8 170 48.8
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 9.7e-33 144.1 166 48.2
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 1.6e-32 143.3 135 55.6
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 1.6e-32 143.3 135 55.6
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 6.3e-32 141.4 185 44.9
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 8.2e-32 141.0 135 58.5
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.8e-31 139.8 185 45.9
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.8e-31 139.8 212 43.9
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.4e-31 139.4 185 41.6
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 1.5e-30 136.7 134 54.5
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 7.6e-30 134.4 205 40.0
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 2.9e-29 132.5 185 41.1
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 5.0e-29 131.7 135 51.9
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 1.4e-28 130.2 126 51.6
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 1.9e-28 129.8 131 55.0
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 2.7e-27 125.9 128 53.1
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 2.3e-26 122.9 205 38.0
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 6.9e-23 111.3 103 56.3
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 2.0e-22 109.8 144 50.0
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.9e-21 105.9 122 54.9
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.9e-21 105.9 122 54.9
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 3.8e-21 105.5 91 58.2
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 1.0e-18 97.4 128 49.2
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 1.0e-18 97.4 117 47.0
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 7.4e-17 91.3 114 50.0
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 2.0e-14 83.2 115 47.0
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 2.0e-14 83.2 166 33.7
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.6e-14 82.8 74 51.4
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 1.7e-13 80.1 55 67.3
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 1.8e-10 70.1 206 30.1
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 3.0e-10 69.3 197 26.4
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 7.4e-09 64.7 65 52.3
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 9.7e-09 64.3 44 65.9
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 2.8e-08 62.8 115 39.1
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 2.0e-06 56.6 73 47.9


User provided reference genes

Program Settings