Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G11610 Aethionema arabicum HOM05D000401 ORTHO05D000252 5.8e-62 240.7 124 100.0
Aa31sc1966G10 Aethionema arabicum HOM05D000401 ORTHO05D000252 2.9e-37 158.7 126 72.2
Aa31LG5G11550 Aethionema arabicum HOM05D000401 ORTHO05D000252 1.4e-31 139.8 126 65.1
Thhalv10016086m.g Eutrema salsugineum HOM05D000401 ORTHO05D000252 4.1e-15 85.1 113 48.7
Sp6g41080 Schrenkiella parvula HOM05D000401 ORTHO05D000252 9.4e-12 73.9 115 47.8
CARHR212190 Cardamine hirsuta HOM05D000401 ORTHO05D000252 1.8e-10 69.7 113 45.1
C02p00040 Brassica napus HOM05D000401 ORTHO05D000252 8.8e-10 67.4 103 47.6
BraA02t04676Z Brassica rapa HOM05D000401 ORTHO05D000252 8.8e-10 67.4 63 57.1
Carub.0024s0020 Capsella rubella HOM05D000401 ORTHO05D000252 1.5e-09 66.6 105 46.7
AT5G01840 Arabidopsis thaliana HOM05D000401 ORTHO05D000252 2.6e-09 65.9 95 49.5
Phvul.010G067800 Phaseolus vulgaris HOM05D000401 ORTHO05D000252 4.4e-09 65.1 135 38.5
BcaB05g21907 Brassica carinata HOM05D000401 ORTHO05D000252 5.7e-09 64.7 54 59.3
Lalb_Chr12g0207621 Lupinus albus HOM05D000401 ORTHO05D000252 9.8e-09 63.9 123 42.3
Thecc.04G154200 Theobroma cacao HOM05D000401 ORTHO05D000252 1.3e-08 63.5 137 38.7
Prupe.6G290900 Prunus persica HOM05D000401 ORTHO05D000252 2.8e-08 62.4 148 37.8
Potri.013G155200 Populus trichocarpa HOM05D000401 ORTHO05D000252 6.3e-08 61.2 135 37.8
VMungo0331G2036 Vigna mungo HOM05D000401 ORTHO05D000252 6.3e-08 61.2 136 36.8
BcaC03g13107 Brassica carinata HOM05D000401 ORTHO05D000252 8.3e-08 60.8 102 45.1
BolC2t05982H Brassica oleracea HOM05D000401 ORTHO05D000252 8.3e-08 60.8 102 45.1
CDE06G1575 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 1.4e-07 60.1 125 38.4
Potri.019G128500 Populus trichocarpa HOM05D000401 ORTHO05D000252 2.4e-07 59.3 138 39.1
Haze_24454 Corylus avellana HOM05D000401 ORTHO05D000252 3.1e-07 58.9 126 37.3
Duzib268G1597 Durio zibethinus HOM05D000401 ORTHO05D000252 3.1e-07 58.9 143 35.7
Glyma.09G276400 Glycine max HOM05D000401 ORTHO05D000252 3.1e-07 58.9 54 59.3
Sabra13G0125000 Salix brachista HOM05D000401 ORTHO05D000252 3.1e-07 58.9 135 39.3
TAR633G0869 Trochodendron aralioides HOM05D000401 ORTHO05D000252 3.1e-07 58.9 129 36.4
Gorai.011G129100 Gossypium raimondii HOM05D000401 ORTHO05D000252 4.1e-07 58.5 132 35.6
Medtr4g028930 Medicago truncatula HOM05D000401 ORTHO05D000252 7.0e-07 57.8 139 37.4
Sc21g0004850 Simmondsia chinensis HOM05D000401 ORTHO05D000252 7.0e-07 57.8 59 55.9
CiPaw.10G164400 Carya illinoinensis HOM05D000401 ORTHO05D000252 9.2e-07 57.4 135 36.3
CDE07G0491 Ceratophyllum demersum HOM05D000401 ORTHO05D000252 1.2e-06 57.0 125 35.2
Glyma.01G131900 Glycine max HOM05D000401 ORTHO05D000252 1.2e-06 57.0 134 37.3
Gohir.D10G117200 Gossypium hirsutum HOM05D000401 ORTHO05D000252 1.6e-06 56.6 132 34.8
Nn5g26877 Nelumbo nucifera HOM05D000401 ORTHO05D000252 1.6e-06 56.6 139 36.0
Atru.chr1.2520 Acer truncatum HOM05D000401 ORTHO05D000252 2.0e-06 56.2 71 45.1
Cfa011818 Carpinus fangiana HOM05D000401 ORTHO05D000252 2.0e-06 56.2 133 34.6
Glyma.18G215300 Glycine max HOM05D000401 ORTHO05D000252 2.7e-06 55.8 53 56.6
Gohir.A10G149600 Gossypium hirsutum HOM05D000401 ORTHO05D000252 3.5e-06 55.5 138 34.1
Psat2g052080 Pisum sativum HOM05D000401 ORTHO05D000252 3.5e-06 55.5 29 82.8
PGR004G1085 Punica granatum HOM05D000401 ORTHO05D000252 3.5e-06 55.5 129 36.4
Sabra04G0151800 Salix brachista HOM05D000401 ORTHO05D000252 3.5e-06 55.5 146 30.1
ATR0681G351 Amborella trichopoda HOM05D000401 ORTHO05D000252 4.5e-06 55.1 122 35.2
TWI77G0627 Tripterygium wilfordii HOM05D000401 ORTHO05D000252 4.5e-06 55.1 120 38.3
Aqoxy4G02374 Aquilegia oxysepala HOM05D000401 ORTHO05D000252 5.9e-06 54.7 25 88.0
Dinv12271 Davidia involucrata HOM05D000401 ORTHO05D000252 5.9e-06 54.7 121 38.0
Lalb_Chr07g0190501 Lupinus albus HOM05D000401 ORTHO05D000252 5.9e-06 54.7 132 33.3
Potri.016G134200 Populus trichocarpa HOM05D000401 ORTHO05D000252 7.7e-06 54.3 148 31.8
PGR102G2464 Punica granatum HOM05D000401 ORTHO05D000252 7.7e-06 54.3 32 65.6
RcHm_v2.0_Chr5g0072651 Rosa chinensis HOM05D000401 ORTHO05D000252 7.7e-06 54.3 138 35.5


User provided reference genes

Program Settings