Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG5G10010 Aethionema arabicum HOM05D002105 ORTHO05D012147 1.1e-28 129.8 98 100.0
AL7G25270 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 1.3e-16 89.7 97 58.8
Thhalv10027051m.g Eutrema salsugineum HOM05D002105 ORTHO05D001271 2.9e-16 88.6 95 74.7
Carub.0007s1335 Capsella rubella HOM05D002105 ORTHO05D001271 3.8e-16 88.2 91 56.0
Sp7g25440 Schrenkiella parvula HOM05D002105 ORTHO05D001271 1.9e-15 85.9 95 78.9
CARHR235180 Cardamine hirsuta HOM05D002105 ORTHO05D001271 1.2e-14 83.2 91 53.8
Duzib170G0794 Durio zibethinus HOM05D002105 ORTHO05D001271 1.0e-13 80.1 50 80.0
BcaC06g32686 Brassica carinata HOM05D002105 ORTHO05D001271 1.4e-13 79.7 53 77.4
A03p57320 Brassica napus HOM05D002105 ORTHO05D001271 1.4e-13 79.7 53 77.4
C07p55520 Brassica napus HOM05D002105 ORTHO05D001271 1.4e-13 79.7 53 77.4
BolC7t46031H Brassica oleracea HOM05D002105 ORTHO05D001271 1.4e-13 79.7 53 77.4
BraA03t14798Z Brassica rapa HOM05D002105 ORTHO05D001271 1.4e-13 79.7 53 77.4
COL.COLO4_27176 Corchorus olitorius HOM05D002105 ORTHO05D001271 1.4e-13 79.7 52 76.9
A01p18720 Brassica napus HOM05D002105 ORTHO05D001271 4.0e-13 78.2 53 79.2
RcHm_v2.0_Chr5g0033561 Rosa chinensis HOM05D002105 ORTHO05D001271 6.8e-13 77.4 52 75.0
Gohir.D01G049800 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.5e-12 76.3 50 78.0
Gorai.002G069700 Gossypium raimondii HOM05D002105 ORTHO05D001271 1.5e-12 76.3 50 78.0
FvH4_3g19880 Fragaria vesca HOM05D002105 ORTHO05D001271 2.6e-12 75.5 52 73.1
FAN11G1959 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.6e-12 75.5 52 73.1
FAN25G0802 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.6e-12 75.5 52 73.1
A08p20450 Brassica napus HOM05D002105 ORTHO05D001271 3.4e-12 75.1 99 51.5
Gohir.A01G063400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 3.4e-12 75.1 50 76.0
QL08p022033 Quercus lobata HOM05D002105 ORTHO05D001271 4.4e-12 74.7 51 70.6
BcaB03g12536 Brassica carinata HOM05D002105 ORTHO05D001271 5.7e-12 74.3 53 69.8
C08p10310 Brassica napus HOM05D002105 ORTHO05D001271 7.5e-12 73.9 99 50.5
Thecc.07G090000 Theobroma cacao HOM05D002105 ORTHO05D001271 7.5e-12 73.9 50 74.0
FAN16G0257 Fragaria x ananassa HOM05D002105 ORTHO05D001271 9.8e-12 73.6 51 70.6
FAN21G0480 Fragaria x ananassa HOM05D002105 ORTHO05D001271 9.8e-12 73.6 52 71.2
THA.LOC104813390 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 9.8e-12 73.6 50 76.0
THA.LOC104811864 Tarenaya hassleriana HOM05D002105 ORTHO05D001271 1.3e-11 73.2 53 75.5
BcaC07g38286 Brassica carinata HOM05D002105 ORTHO05D012147 2.2e-11 72.4 99 49.5
BolC8t48712H Brassica oleracea HOM05D002105 ORTHO05D001271 2.2e-11 72.4 99 49.5
Cfa020580 Carpinus fangiana HOM05D002105 ORTHO05D001271 3.7e-11 71.6 50 66.0
BraA01t01818Z Brassica rapa HOM05D002105 ORTHO05D001271 4.8e-11 71.2 52 76.9
Prupe.4G180600 Prunus persica HOM05D002105 ORTHO05D001271 4.8e-11 71.2 100 48.0
BcaC05g28124 Brassica carinata HOM05D002292 ORTHO05D012147 1.1e-10 70.1 97 48.5
A02p31100 Brassica napus HOM05D002292 ORTHO05D012147 1.4e-10 69.7 99 48.5
BraA03t14760Z Brassica rapa HOM05D002105 ORTHO05D012147 1.8e-10 69.3 99 51.5
Sabra16G0261900 Salix brachista HOM05D002105 ORTHO05D001271 1.8e-10 69.3 49 67.3
AT4G27500 Arabidopsis thaliana HOM05D002105 ORTHO05D001271 3.1e-10 68.6 52 69.2
Lj8A155G95 Lonicera japonica HOM05D002105 ORTHO05D001271 4.1e-10 68.2 50 66.0
Potri.001G399400 Populus trichocarpa HOM05D002105 ORTHO05D001271 4.1e-10 68.2 49 69.4
C05p41580 Brassica napus HOM05D002292 ORTHO05D012147 5.4e-10 67.8 53 69.8
Lj1C842G6 Lonicera japonica HOM05D002105 ORTHO05D001271 5.4e-10 67.8 51 70.6
MD11G1247800 Malus domestica HOM05D002105 ORTHO05D001271 5.4e-10 67.8 49 69.4
C02p31010 Brassica napus HOM05D005083 ORTHO05D012147 7.0e-10 67.4 99 54.5
Aqoxy1G02397 Aquilegia oxysepala HOM05D002105 ORTHO05D001271 9.1e-10 67.0 50 68.0
BcaC06g34529 Brassica carinata HOM05D002292 ORTHO05D012147 9.1e-10 67.0 99 48.5
C07p27520 Brassica napus HOM05D002292 ORTHO05D012147 9.1e-10 67.0 99 48.5
Potri.011G119700 Populus trichocarpa HOM05D002105 ORTHO05D001271 9.1e-10 67.0 53 66.0
Gohir.A02G080501 Gossypium hirsutum HOM05D002105 ORTHO05D001271 1.6e-09 66.2 42 76.2
PSO541G4007 Papaver somniferum HOM05D002105 ORTHO05D001271 1.6e-09 66.2 99 45.5
CiPaw.11G170100 Carya illinoinensis HOM05D002105 ORTHO05D001271 2.0e-09 65.9 50 64.0
Oeu051068.1 Olea europaea HOM05D002105 ORTHO05D001271 2.0e-09 65.9 47 63.8
BcaC01g03915 Brassica carinata HOM05D002292 ORTHO05D012147 2.7e-09 65.5 99 46.5
BolC3t16989H Brassica oleracea HOM05D002292 ORTHO05D012147 2.7e-09 65.5 99 46.5
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 2.7e-09 65.5 51 66.7
Phvul.005G072500 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 2.7e-09 65.5 50 68.0
BolC7t43283H Brassica oleracea HOM05D002292 ORTHO05D012147 3.5e-09 65.1 99 47.5
Sabra11G0104100 Salix brachista HOM05D002105 ORTHO05D001271 3.5e-09 65.1 51 66.7
Cpa.g.sc80.68 Carica papaya HOM05D002105 ORTHO05D001271 4.5e-09 64.7 48 68.8
SGA_v2.0_scaffold34G13814 Striga asiatica HOM05D002105 ORTHO05D001271 5.9e-09 64.3 49 69.4
Lj3g0009937 Lotus japonicus HOM05D002105 ORTHO05D001271 7.7e-09 63.9 50 64.0
PSO675G3374 Papaver somniferum HOM05D002105 ORTHO05D001271 7.7e-09 63.9 99 45.5
Psat5g243840 Pisum sativum HOM05D002105 ORTHO05D001271 7.7e-09 63.9 93 43.0
Hma1.2p1_0531F.1_g173370 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 1.0e-08 63.5 51 60.8
TWI39G0142 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 1.0e-08 63.5 51 66.7
TWI38G1694 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 1.3e-08 63.2 89 47.2
SGA_v2.0_scaffold73G24261 Striga asiatica HOM05D002105 ORTHO05D001271 1.7e-08 62.8 49 67.3
CSS0000814 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 2.9e-08 62.0 50 64.0
Ca_01848_v3 Cicer arietinum L. HOM05D002105 ORTHO05D001271 2.9e-08 62.0 93 43.0
Sp6g15880 Schrenkiella parvula HOM05D002105 ORTHO05D001271 2.9e-08 62.0 50 66.0
Gorai.009G386900 Gossypium raimondii HOM05D002105 ORTHO05D001271 5.0e-08 61.2 47 68.1
DCAR_019557 Daucus carota HOM05D002105 ORTHO05D001271 6.5e-08 60.8 51 58.8
Thhalv10013033m.g Eutrema salsugineum HOM05D002105 ORTHO05D001271 6.5e-08 60.8 54 70.4
Hma1.2p1_0898F.1_g234460 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 6.5e-08 60.8 49 65.3
C05p34330 Brassica napus HOM05D002105 ORTHO05D012147 8.5e-08 60.5 53 64.2
Gohir.D05G354300 Gossypium hirsutum HOM05D002105 ORTHO05D001271 8.5e-08 60.5 47 63.8
PGR083G2752 Punica granatum HOM05D002105 ORTHO05D001271 8.5e-08 60.5 48 64.6
TAR626G1709 Trochodendron aralioides HOM05D002105 ORTHO05D001271 8.5e-08 60.5 50 60.0
Oeu005407.1 Olea europaea HOM05D002105 ORTHO05D001271 1.1e-07 60.1 44 65.9
CANSAT56G3600 Cannabis sativa HOM05D002105 ORTHO05D001271 1.5e-07 59.7 34 76.5
DCAR_020991 Daucus carota HOM05D002105 ORTHO05D001271 1.5e-07 59.7 46 65.2
TAR627G1018 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.9e-07 59.3 50 62.0
Migut.H01943 Erythranthe guttata HOM05D002105 ORTHO05D001271 2.5e-07 58.9 48 56.2
C08p14880 Brassica napus HOM05D002105 ORTHO05D012147 3.2e-07 58.5 53 62.3
VMungo1080G0407 Vigna mungo HOM05D002105 ORTHO05D001271 5.5e-07 57.8 51 62.7
HPP92_028219 Vanilla planifolia HOM05D002105 ORTHO05D001271 7.2e-07 57.4 46 54.3
ATR0737G090 Amborella trichopoda HOM05D002105 ORTHO05D001271 9.4e-07 57.0 50 54.0
Manes.03G109600 Manihot esculenta HOM05D002105 ORTHO05D001271 1.2e-06 56.6 51 62.7
Nitab4.5_0001336g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 1.2e-06 56.6 50 66.0
Gorai.009G386100 Gossypium raimondii HOM05D002105 ORTHO05D001271 1.6e-06 56.2 40 67.5
MD03G1228300 Malus domestica HOM05D002105 ORTHO05D001271 1.6e-06 56.2 39 66.7
TAR671G0001 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.6e-06 56.2 48 60.4
Medtr4g132200 Medicago truncatula HOM05D002105 ORTHO05D001271 2.7e-06 55.5 50 60.0
Nitab4.5_0000207g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 2.7e-06 55.5 50 60.0
Oeu019314.1 Olea europaea HOM05D002105 ORTHO05D001271 2.7e-06 55.5 50 60.0
Peaxi162Scf00069g01513 Petunia axillaris HOM05D002105 ORTHO05D001271 3.6e-06 55.1 50 64.0
PGSC0003DMG400012445 Solanum tuberosum HOM05D002105 ORTHO05D001271 3.6e-06 55.1 50 66.0
arahy.Tifrunner.gnm1.ann1.92S0K9 Arachis hypogaea HOM05D002105 ORTHO05D001271 4.7e-06 54.7 47 57.4
arahy.Tifrunner.gnm1.ann1.E3CL15 Arachis hypogaea HOM05D002105 ORTHO05D001271 4.7e-06 54.7 47 57.4
Lalb_Chr19g0134171 Lupinus albus HOM05D002105 ORTHO05D001271 4.7e-06 54.7 48 54.2
SalBow7G4171 Salvia bowleyana HOM05D002105 ORTHO05D001271 4.7e-06 54.7 29 75.9
Glyma.12G224800 Glycine max HOM05D002105 ORTHO05D001271 6.1e-06 54.3 50 58.0
Lalb_Chr20g0109631 Lupinus albus HOM05D002105 ORTHO05D001271 6.1e-06 54.3 50 60.0
C03p18970 Brassica napus HOM05D002105 ORTHO05D012147 8.0e-06 53.9 42 66.7
unitig_747.g21573 Utricularia gibba HOM05D002105 ORTHO05D001271 8.0e-06 53.9 102 37.3


User provided reference genes

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