Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 3.3e-95 352.1 226 100.0
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 4.9e-59 231.9 241 65.6
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 6.0e-57 224.9 231 62.3
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.8e-56 223.4 230 64.8
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 1.9e-55 219.9 231 61.9
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 1.3e-54 217.2 239 64.4
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 2.1e-54 216.5 223 60.5
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 6.3e-54 214.9 231 59.7
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 8.2e-54 214.5 231 60.6
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 2.4e-53 213.0 230 61.3
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 4.1e-53 212.2 230 60.0
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 6.9e-53 211.5 231 58.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.6e-52 209.5 231 58.4
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 5.8e-52 208.4 230 60.4
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 1.7e-51 206.8 230 60.9
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 5.0e-51 205.3 231 57.6
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.9e-50 203.4 221 59.3
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 3.0e-40 169.5 215 57.2
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 6.7e-40 168.3 215 53.0
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.8e-30 136.3 231 44.2
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.1e-29 132.9 232 46.1
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 4.1e-29 132.5 215 38.1
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.2e-28 131.0 218 42.7
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.0e-28 130.2 116 59.5
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.5e-28 129.4 223 47.1
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 4.5e-28 129.0 208 42.8
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 7.7e-28 128.3 128 49.2
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 1.0e-27 127.9 182 46.2
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.3e-27 127.5 219 42.9
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.3e-27 127.5 215 45.6
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 1.3e-27 127.5 252 39.7
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.2e-27 126.7 221 42.5
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 2.9e-27 126.3 233 44.6
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 2.9e-27 126.3 199 45.7
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 3.8e-27 125.9 197 43.1
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 5.0e-27 125.6 191 51.3
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 8.5e-27 124.8 170 54.1
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.1e-26 124.4 218 44.0
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.1e-26 124.4 174 50.6
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 4.2e-26 122.5 203 42.9
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 4.2e-26 122.5 220 40.9
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 4.2e-26 122.5 177 46.9
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 9.4e-26 121.3 169 55.6
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 2.7e-25 119.8 218 43.6
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 3.6e-25 119.4 125 51.2
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.0e-24 117.9 164 45.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 1.4e-24 117.5 195 39.5
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 1.4e-24 117.5 188 40.4
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 1.8e-24 117.1 164 46.3
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 3.0e-24 116.3 197 45.2
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 4.0e-24 115.9 167 48.5
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 4.0e-24 115.9 149 49.0
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 5.2e-24 115.5 221 42.5
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 5.2e-24 115.5 221 39.8
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 6.7e-24 115.2 211 44.5
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 2.0e-23 113.6 152 42.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 2.0e-23 113.6 179 43.0
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.6e-23 113.2 165 46.1
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.6e-23 113.2 165 46.7
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.6e-23 113.2 164 43.3
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 5.7e-23 112.1 165 47.3
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 5.7e-23 112.1 197 42.1
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 7.5e-23 111.7 173 41.6
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.3e-22 110.9 165 47.3
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-22 110.9 178 46.6
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.7e-22 110.5 169 50.9
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.8e-22 109.8 149 51.0
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 4.8e-22 109.0 137 46.0
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 8.2e-22 108.2 137 51.8
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 8.2e-22 108.2 127 55.1
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 8.2e-22 108.2 188 47.9
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.8e-21 107.1 156 46.8
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 3.1e-21 106.3 157 47.8
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 4.1e-21 105.9 163 41.7
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 5.3e-21 105.5 164 40.2
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 5.3e-21 105.5 173 43.4
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 5.3e-21 105.5 167 38.9
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 7.0e-21 105.1 152 53.3
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 9.1e-21 104.8 193 42.0
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.0e-20 103.6 239 38.9
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 3.5e-20 102.8 150 43.3
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 3.5e-20 102.8 173 45.7
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.3e-19 100.9 217 42.9
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 2.2e-19 100.1 163 39.9
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.9e-19 99.8 174 48.3
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 6.5e-19 98.6 73 63.0
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 5.5e-18 95.5 165 43.0
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 2.7e-17 93.2 196 44.9
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 4.7e-17 92.4 152 43.4
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 8.0e-17 91.7 143 54.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.0e-16 91.3 241 32.8
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.4e-16 90.9 138 45.7
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 3.0e-16 89.7 174 49.4
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 8.8e-16 88.2 131 55.0
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.0e-15 87.0 192 33.9
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 3.4e-15 86.3 187 32.6
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.5e-15 85.1 110 51.8
AL5G28080 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 9.8e-15 84.7 106 62.3
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 9.8e-15 84.7 122 45.9
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 1.3e-14 84.3 214 31.8
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 3.7e-14 82.8 158 43.7
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.8e-13 80.5 137 46.7
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.4e-13 80.1 93 62.4
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 4.1e-13 79.3 110 50.0
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 7.0e-13 78.6 70 52.9
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.3e-11 74.3 48 62.5
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 3.8e-11 72.8 86 44.2
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 9.4e-10 68.2 121 39.7
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 2.1e-09 67.0 51 56.9
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 8.0e-09 65.1 218 31.2
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 8.0e-09 65.1 163 39.3
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 3.0e-08 63.2 169 30.8
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 6.8e-08 62.0 67 62.7
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 8.8e-08 61.6 201 33.3
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 8.8e-08 61.6 154 31.8
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 2.2e-06 57.0 35 68.6
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 4.9e-06 55.8 64 40.6
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.9e-06 55.8 137 36.5


User provided reference genes

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