Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.4e-67 259.6 140 100.0
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 2.1e-36 156.0 124 66.9
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.1e-36 156.0 124 66.9
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 4.8e-36 154.8 124 66.1
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.8e-35 152.9 123 67.5
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.0e-34 149.4 124 63.7
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 5.8e-34 147.9 124 63.7
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-32 143.3 124 60.5
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.4e-32 142.5 121 62.8
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.2e-32 142.1 124 60.5
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 7.1e-32 141.0 124 60.5
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.2e-31 140.2 121 62.0
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.1e-31 139.4 123 59.3
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 2.3e-30 136.0 121 59.5
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.5e-29 132.5 123 56.9
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 4.8e-28 128.3 123 56.9
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.3e-25 120.2 120 55.0
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 1.3e-25 120.2 115 55.7
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 4.9e-25 118.2 123 54.5
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 4.9e-25 118.2 123 54.5
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 1.1e-24 117.1 123 53.7
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 1.1e-24 117.1 123 53.7
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.1e-24 117.1 123 53.7
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 3.2e-24 115.5 142 50.7
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 5.5e-24 114.8 118 54.2
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 5.5e-24 114.8 123 48.8
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.5e-23 112.1 124 50.0
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.3e-20 103.6 102 58.8
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.4e-19 100.1 116 50.0
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.8e-19 99.8 113 48.7
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.3e-19 98.2 114 49.1
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.7e-17 93.2 115 44.3
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.9e-17 91.7 116 48.3
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.9e-17 91.7 115 44.3
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.5e-17 91.3 111 45.0
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.1e-16 90.5 111 45.9
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 3.2e-16 89.0 115 41.7
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 3.2e-16 89.0 115 41.7
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 3.2e-16 89.0 115 41.7
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.2e-16 89.0 114 44.7
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 4.2e-16 88.6 115 45.2
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 5.5e-16 88.2 111 42.3
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 9.3e-16 87.4 124 45.2
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.5e-15 85.5 115 45.2
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 3.5e-15 85.5 112 42.0
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 6.0e-15 84.7 112 42.0
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 7.9e-15 84.3 112 42.0
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-14 84.0 114 44.7
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.8e-14 83.2 112 41.1
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.8e-14 83.2 111 38.7
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.3e-14 82.8 116 40.5
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.0e-14 82.4 115 43.5
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 3.9e-14 82.0 115 39.1
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 3.9e-14 82.0 115 39.1
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 3.9e-14 82.0 115 39.1
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 3.9e-14 82.0 115 39.1
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 3.9e-14 82.0 115 39.1
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 6.7e-14 81.3 111 42.3
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 8.7e-14 80.9 115 38.3
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-13 80.1 116 40.5
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 3.3e-13 79.0 115 37.4
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 5.7e-13 78.2 115 37.4
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 7.4e-13 77.8 116 44.0
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 9.6e-13 77.4 111 43.2
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-12 77.0 114 38.6
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.8e-12 75.9 110 42.7
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.8e-12 75.1 115 38.3
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 4.1e-11 72.0 108 39.8
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.6e-10 69.3 116 37.9
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-09 67.0 105 36.2
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.2e-09 66.2 112 38.4
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.2e-09 66.2 112 39.3
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-08 63.2 117 37.6
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 2.5e-08 62.8 117 37.6
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 2.7e-07 59.3 118 37.3
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 4.6e-07 58.5 116 38.8
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 1.3e-06 57.0 121 33.1
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 3.9e-06 55.5 113 32.7
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 5.1e-06 55.1 113 32.7
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 5.1e-06 55.1 113 32.7
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 5.1e-06 55.1 115 33.9
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 5.1e-06 55.1 115 33.0
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 8.7e-06 54.3 115 33.9
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 8.7e-06 54.3 115 33.9


User provided reference genes

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