Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.3e-164 581.6 292 100.0
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 6.0e-134 481.1 295 84.1
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 8.7e-133 477.2 296 84.5
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.9e-132 476.1 294 82.7
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 4.3e-132 474.9 293 83.6
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.7e-131 471.9 293 82.6
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.5e-129 464.9 293 80.9
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 5.0e-128 461.5 294 81.0
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 5.0e-128 461.5 294 81.0
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.6e-126 456.4 294 81.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.6e-126 456.4 294 81.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.8e-114 416.4 288 74.3
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.2e-111 405.6 287 73.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.2e-111 405.6 292 74.7
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.0e-109 400.6 280 73.2
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.3e-109 399.4 280 73.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 3.3e-108 395.6 282 72.7
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.2e-105 387.1 291 70.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 5.9e-105 384.8 298 68.5
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 7.7e-105 384.4 235 81.3
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.3e-104 383.6 251 76.5
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.2e-104 382.9 251 76.5
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.2e-104 382.9 294 68.4
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.0e-104 381.7 284 70.1
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.5e-104 381.3 251 75.3
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 6.5e-104 381.3 253 76.3
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 6.5e-104 381.3 292 67.8
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.1e-103 380.6 239 79.1
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.5e-103 380.2 232 80.6
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.5e-103 380.2 239 77.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.2e-103 379.0 232 80.6
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.2e-103 379.0 296 68.2
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.2e-103 378.6 244 77.0
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 5.5e-103 378.3 238 77.3
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.5e-103 378.3 242 77.7
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.6e-102 375.6 294 67.7
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.0e-101 374.0 231 79.7
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.0e-101 374.0 232 78.9
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.4e-101 373.6 262 71.0
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.8e-101 373.2 302 66.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.3e-101 372.9 247 75.3
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 4.0e-101 372.1 232 79.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 4.0e-101 372.1 286 68.5
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.2e-101 371.7 236 78.0
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 6.7e-101 371.3 247 74.9
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 6.7e-101 371.3 249 76.7
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.5e-100 370.2 279 68.1
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.6e-100 369.4 296 66.6
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 2.6e-100 369.4 242 77.3
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.3e-100 369.0 329 63.5
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 3.3e-100 369.0 232 78.9
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 3.3e-100 369.0 232 78.0
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.7e-100 368.2 302 65.6
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 5.7e-100 368.2 235 75.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 7.5e-100 367.9 236 77.5
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 9.7e-100 367.5 273 68.9
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 9.7e-100 367.5 214 82.7
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 9.7e-100 367.5 288 67.0
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 9.7e-100 367.5 300 64.3
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 9.7e-100 367.5 233 79.0
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.3e-99 367.1 300 64.0
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.2e-99 366.3 290 65.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.2e-99 366.3 231 78.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.2e-99 366.3 242 75.2
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 2.2e-99 366.3 289 64.4
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 2.2e-99 366.3 233 78.5
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.8e-99 365.9 242 72.7
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.8e-99 365.9 226 78.8
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 3.7e-99 365.5 286 64.3
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 8.2e-99 364.4 292 64.7
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 3.1e-98 362.5 226 77.0
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 3.1e-98 362.5 226 77.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 9.1e-98 360.9 292 66.8
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.2e-97 360.5 302 64.6
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.2e-97 360.5 297 65.0
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 2.0e-97 359.8 296 63.2
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.5e-97 358.6 296 65.9
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 7.7e-97 357.8 309 61.8
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.3e-96 357.1 232 76.7
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.7e-96 356.7 238 73.1
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 6.5e-96 354.8 254 69.3
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 8.5e-96 354.4 215 80.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 3.2e-95 352.4 237 74.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 4.2e-95 352.1 217 79.3
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 7.2e-95 351.3 344 57.3
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 9.4e-95 350.9 225 76.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 9.4e-95 350.9 259 69.5
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 2.1e-94 349.7 242 71.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 3.6e-94 349.0 243 70.0
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.4e-93 347.1 314 60.2
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.0e-93 345.9 228 75.0
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.2e-93 345.1 301 60.5
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.8e-93 344.7 301 60.5
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 8.8e-93 344.4 301 60.5
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.5e-92 343.6 294 62.6
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 3.5e-89 332.4 264 65.9
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 3.2e-87 325.9 230 68.7
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.0e-85 319.3 234 66.7
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.9e-77 291.2 211 71.6
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 5.7e-76 288.5 301 56.5
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 6.4e-75 285.0 222 62.2
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 2.4e-74 283.1 204 65.2
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.5e-73 279.3 246 62.6
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-72 277.7 217 68.7
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 9.5e-71 271.2 202 62.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 4.1e-66 255.8 234 57.3
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.0e-64 251.1 211 59.7
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.1e-63 247.7 224 60.7
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.8e-37 160.6 170 52.9
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.0e-36 157.1 239 42.7
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.1e-34 151.4 235 39.1
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.4e-34 150.2 229 38.9
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.6e-31 139.0 93 76.3
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.3e-30 137.9 252 36.9
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.8e-30 136.7 94 74.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.2e-27 127.1 136 51.5
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.3e-24 117.9 131 46.6
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 8.7e-08 62.0 80 42.5
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.2e-06 57.4 69 49.3


User provided reference genes

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