Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.1e-144 516.5 257 100.0
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.4e-139 499.6 257 96.5
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.1e-138 495.7 257 95.7
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.1e-138 495.7 257 95.7
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 3.6e-138 495.0 257 95.3
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 3.6e-138 495.0 257 95.3
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 3.6e-138 495.0 257 95.3
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 3.6e-138 495.0 257 95.3
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 3.6e-138 495.0 257 95.3
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 6.1e-138 494.2 257 94.9
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 6.1e-138 494.2 257 94.9
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 1.4e-137 493.0 257 94.9
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 4.2e-131 471.5 257 90.7
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 5.3e-126 454.5 257 86.4
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 7.0e-126 454.1 257 84.8
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 8.5e-124 447.2 257 84.4
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 84.0
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 84.0
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.2e-122 443.4 249 86.7
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 2.7e-122 442.2 257 82.9
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.4e-121 439.9 249 86.3
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 82.1
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.5e-120 436.4 256 83.2
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 82.5
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 82.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.5e-120 434.1 257 81.7
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 9.7e-120 433.7 257 81.3
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 9.7e-120 433.7 256 80.9
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 2.2e-119 432.6 258 82.9
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 8.2e-119 430.6 257 79.8
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.4e-118 429.9 257 79.8
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 83.3
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 2.4e-118 429.1 257 80.9
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 3.1e-118 428.7 256 82.4
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 4.1e-118 428.3 256 80.9
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 4.1e-118 428.3 259 80.7
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 7.0e-118 427.6 256 82.0
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 9.1e-118 427.2 257 80.9
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 1.2e-117 426.8 257 80.2
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 82.9
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-117 426.4 257 82.9
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 2.0e-117 426.0 256 80.5
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 80.5
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 79.8
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 2.7e-117 425.6 257 80.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 5.9e-117 424.5 255 82.4
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 5.9e-117 424.5 255 80.0
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 7.7e-117 424.1 256 79.3
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 7.7e-117 424.1 256 79.3
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 80.9
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 80.9
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 80.9
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.3e-116 423.3 255 80.0
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.2e-116 422.5 302 70.9
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 2.9e-116 422.2 257 80.2
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.9e-116 422.2 258 80.6
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 2.9e-116 422.2 257 80.5
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 81.7
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 5.0e-116 421.4 257 79.0
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 6.5e-116 421.0 257 79.4
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.5e-115 419.9 255 80.8
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.9e-115 419.5 257 80.2
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.9e-115 419.5 257 79.0
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.9e-115 419.5 257 80.9
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 4.2e-115 418.3 257 80.2
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 5.5e-115 417.9 257 78.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.8
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 9.4e-115 417.2 255 78.8
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 1.2e-114 416.8 257 79.8
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.2e-114 416.8 257 79.8
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.2e-114 416.8 257 79.8
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.2e-114 416.8 257 79.4
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.6e-114 416.4 271 75.6
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 1.6e-114 416.4 257 79.8
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.1e-114 416.0 257 77.8
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 2.1e-114 416.0 256 79.3
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.7e-114 415.6 271 75.3
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 2.7e-114 415.6 257 78.2
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 1.8e-113 412.9 257 78.6
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.2e-112 410.2 257 77.4
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 1.2e-112 410.2 257 77.4
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.5e-112 409.8 257 77.0
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.6e-112 409.1 257 77.0
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 3.4e-112 408.7 257 78.6
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 6.3e-111 404.4 263 75.3
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 5.4e-110 401.4 257 76.3
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 9.1e-110 400.6 255 74.5
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.6e-109 399.8 251 77.3
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 1.5e-107 393.3 257 74.3
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 4.2e-107 391.7 254 74.4
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 7.2e-107 391.0 249 75.9
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 4.7e-106 388.3 257 77.4
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.0e-105 387.1 255 73.7
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.3e-105 386.0 230 81.7
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.6e-104 382.5 250 74.4
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.7e-103 379.8 417 52.0
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 9.5e-99 364.0 217 80.2
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.6e-98 363.2 281 68.0
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 3.6e-98 362.1 257 72.0
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.4e-94 350.1 231 73.2
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 4.1e-94 348.6 214 77.1
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.0e-92 344.0 255 69.0
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 4.7e-90 335.1 251 64.5
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 4.4e-88 328.6 247 64.4
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 9.8e-88 327.4 254 64.6
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 3.7e-87 325.5 250 64.8
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 7.0e-86 321.2 198 79.3
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.9e-83 313.2 251 62.5
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 3.4e-80 302.4 153 94.8
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.3e-79 300.4 198 73.2
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.6e-69 266.9 170 74.1
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 1.7e-68 263.5 159 82.4
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 4.2e-62 242.3 142 80.3
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 8.7e-60 234.6 265 47.5
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 2.5e-59 233.0 132 84.8
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 2.4e-57 226.5 247 45.7
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 5.4e-54 215.3 130 79.2
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 1.8e-49 200.3 198 57.6
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 3.1e-49 199.5 105 96.2
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 2.0e-48 196.8 156 63.5
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.3e-47 194.1 119 76.5
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 3.8e-47 192.6 114 80.7
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.2e-45 187.6 267 38.2
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.3e-44 184.1 112 81.2
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 4.8e-42 175.6 105 81.9
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-41 174.1 257 42.8
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 4.5e-40 169.1 105 80.0
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.5e-38 162.2 105 75.2
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 1.2e-37 161.0 104 76.0
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 1.3e-31 141.0 91 69.2
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 6.5e-31 138.7 121 58.7
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 7.7e-24 115.2 102 57.8
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 4.2e-22 109.4 79 73.4
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 4.6e-21 105.9 95 57.9
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 2.2e-18 97.1 60 75.0
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 4.5e-16 89.4 55 78.2
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.8e-09 67.4 58 63.8
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 7.2e-06 55.5 41 68.3


User provided reference genes

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