Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G880 Aethionema arabicum HOM05D002011 ORTHO05D001948 1.8e-32 142.1 78 100.0
AL2G40840 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 4.2e-18 94.4 83 66.3
Sp5g35160 Schrenkiella parvula HOM05D002011 ORTHO05D001948 1.6e-17 92.4 83 65.1
AT1G80610 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 4.7e-17 90.9 82 64.6
Carub.0002s2694 Capsella rubella HOM05D002011 ORTHO05D001948 8.0e-17 90.1 82 64.6
BraA07t32012Z Brassica rapa HOM05D002011 ORTHO05D001948 1.8e-16 89.0 83 62.7
A07p45090 Brassica napus HOM05D002011 ORTHO05D001948 2.3e-16 88.6 83 62.7
BcaC03g15943 Brassica carinata HOM05D002011 ORTHO05D001948 5.2e-16 87.4 76 67.1
BcaB05g25241 Brassica carinata HOM05D002011 ORTHO05D001948 1.2e-15 86.3 76 65.8
BcaB02g07260 Brassica carinata HOM05D002011 ORTHO05D001948 1.5e-15 85.9 83 60.2
A02p23330 Brassica napus HOM05D002011 ORTHO05D001948 2.6e-15 85.1 76 65.8
BolC2t09720H Brassica oleracea HOM05D002011 ORTHO05D001948 2.6e-15 85.1 76 65.8
BraA02t07327Z Brassica rapa HOM05D002011 ORTHO05D001948 2.6e-15 85.1 76 65.8
AT1G15800 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 4.4e-15 84.3 73 64.4
Thhalv10008783m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 4.4e-15 84.3 72 62.5
C02p37050 Brassica napus HOM05D002011 ORTHO05D001948 1.3e-14 82.8 76 64.5
BcaC08g45329 Brassica carinata HOM05D002011 ORTHO05D001948 1.7e-14 82.4 83 59.0
C06p53920 Brassica napus HOM05D002011 ORTHO05D001948 3.7e-14 81.3 81 59.3
A07p26760 Brassica napus HOM05D000930 ORTHO05D001948 1.1e-13 79.7 79 59.5
CARHR073910 Cardamine hirsuta HOM05D002011 ORTHO05D001948 1.1e-13 79.7 82 58.5
BolC6t40406H Brassica oleracea HOM05D002011 ORTHO05D001948 1.8e-13 79.0 81 58.0
CARHR016310 Cardamine hirsuta HOM05D002011 ORTHO05D001948 2.4e-13 78.6 73 60.3
Thhalv10019140m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 3.2e-13 78.2 81 60.5
AL1G27950 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 4.1e-13 77.8 73 60.3
C06p29390 Brassica napus HOM05D000930 ORTHO05D001948 1.2e-12 76.3 79 58.2
BolC6t38103H Brassica oleracea HOM05D000930 ORTHO05D001948 1.2e-12 76.3 79 58.2
Carub.0001s1559 Capsella rubella HOM05D002011 ORTHO05D001948 1.6e-12 75.9 75 62.7
Aa31LG7G400 Aethionema arabicum HOM05D002011 ORTHO05D001948 2.3e-11 72.0 74 58.1
BraA07t30319Z Brassica rapa HOM05D000930 ORTHO05D001948 2.3e-11 72.0 88 53.4
BcaB03g14520 Brassica carinata HOM05D002011 ORTHO05D001948 2.9e-11 71.6 72 58.3
A06p11870 Brassica napus HOM05D002011 ORTHO05D001948 2.9e-11 71.6 69 56.5
C05p14050 Brassica napus HOM05D002011 ORTHO05D001948 2.9e-11 71.6 69 58.0
BolC5t30136H Brassica oleracea HOM05D002011 ORTHO05D001948 2.9e-11 71.6 69 58.0
Sp1g14100 Schrenkiella parvula HOM05D002011 ORTHO05D001948 3.9e-11 71.2 66 60.6
BraA06t24357Z Brassica rapa HOM05D002011 ORTHO05D001948 1.1e-10 69.7 69 55.1
A09p61180 Brassica napus HOM05D002011 ORTHO05D001948 1.9e-10 68.9 72 56.9
BraA09t41492Z Brassica rapa HOM05D002011 ORTHO05D001948 1.9e-10 68.9 72 56.9
BcaC07g41480 Brassica carinata HOM05D002011 ORTHO05D001948 7.3e-10 67.0 72 55.6
C08p44770 Brassica napus HOM05D002011 ORTHO05D001948 9.5e-10 66.6 72 55.6
THA.LOC104813579 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 9.5e-10 66.6 108 42.6
THA.LOC104813311 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 6.2e-09 63.9 101 47.5


User provided reference genes

Program Settings