Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.6e-46 189.1 96 100.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 2.9e-37 158.3 99 83.8
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.9e-37 157.9 99 82.8
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 3.9e-37 157.9 99 82.8
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 6.6e-37 157.1 94 83.0
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.5e-36 156.0 94 83.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 5.6e-36 154.1 94 81.9
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 3.6e-35 151.4 101 80.2
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 3.6e-35 151.4 101 80.2
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 4.7e-35 151.0 101 80.2
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.8e-34 149.1 101 79.2
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 3.1e-34 148.3 94 79.8
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.3e-32 142.9 99 78.8
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.3e-32 142.9 99 78.8
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.3e-32 142.9 99 78.8
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.9e-32 141.7 99 78.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 2.4e-31 138.7 99 76.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.1e-28 129.8 97 69.1
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.3e-28 127.9 96 69.8
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 7.3e-28 127.1 97 71.1
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.2e-27 126.3 96 68.8
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.6e-27 124.8 95 69.5
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 8.0e-27 123.6 97 70.1
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 8.0e-27 123.6 96 66.7
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.4e-26 122.9 96 69.8
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.3e-26 122.1 96 68.8
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 4.0e-26 121.3 96 67.7
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.2e-25 119.8 96 65.6
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.2e-25 119.8 96 68.8
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.2e-25 119.8 93 73.1
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.5e-25 119.4 97 64.9
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.5e-25 119.4 96 66.7
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.5e-25 119.4 96 63.5
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 2.0e-25 119.0 96 67.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 2.0e-25 119.0 96 67.7
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.0e-25 119.0 96 66.7
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.6e-25 118.6 96 65.6
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 3.4e-25 118.2 96 66.7
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 5.8e-25 117.5 96 66.7
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 7.5e-25 117.1 96 65.6
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.5e-25 117.1 96 63.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.5e-25 117.1 96 63.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 7.5e-25 117.1 96 63.5
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 1.7e-24 115.9 97 62.9
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 1.7e-24 115.9 97 63.9
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.7e-24 115.9 96 62.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 2.2e-24 115.5 96 64.6
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 2.2e-24 115.5 93 67.7
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.2e-24 115.5 94 63.8
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 2.2e-24 115.5 96 65.6
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 2.9e-24 115.2 96 65.6
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 3.7e-24 114.8 96 65.6
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 3.7e-24 114.8 96 65.6
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 3.7e-24 114.8 101 60.4
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 6.4e-24 114.0 94 64.9
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 6.4e-24 114.0 99 67.7
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 8.3e-24 113.6 98 65.3
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 8.3e-24 113.6 98 64.3
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.1e-23 113.2 97 61.9
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.1e-23 113.2 94 64.9
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.1e-23 113.2 93 65.6
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.4e-23 112.8 96 64.6
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.9e-23 112.5 97 66.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.9e-23 112.5 96 63.5
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.9e-23 112.5 94 66.0
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.9e-23 112.5 97 63.9
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 2.4e-23 112.1 97 60.8
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 5.4e-23 110.9 97 59.8
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 7.1e-23 110.5 100 60.0
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 7.1e-23 110.5 100 60.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.2e-22 109.8 100 60.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 2.7e-22 108.6 78 74.4
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 4.6e-22 107.8 99 60.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 7.8e-22 107.1 97 62.9
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 7.8e-22 107.1 96 63.5
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.7e-21 105.9 86 64.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 2.3e-21 105.5 102 61.8
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.3e-21 105.5 95 58.9
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 3.0e-21 105.1 100 60.0
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 3.9e-21 104.8 95 61.1
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 3.9e-21 104.8 99 58.6
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 5.1e-21 104.4 99 57.6
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 6.6e-21 104.0 89 60.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.5e-20 102.8 87 65.5
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.9e-20 102.4 97 58.8
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 2.5e-20 102.1 99 58.6
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 3.3e-20 101.7 101 66.3
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.3e-20 101.7 94 58.5
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 4.3e-20 101.3 100 61.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.2e-19 99.8 99 57.6
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 2.8e-19 98.6 101 58.4
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 6.8e-18 94.0 97 52.6
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 4.1e-15 84.7 89 53.9
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 7.1e-15 84.0 97 53.6
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.0e-13 80.1 80 56.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-12 76.6 65 64.6
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 7.3e-12 73.9 85 49.4
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-10 70.1 92 46.7
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-10 70.1 64 60.9


User provided reference genes

Program Settings