Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.4e-273 944.9 483 100.0
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 1.6e-184 649.8 484 72.1
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.6e-182 642.5 484 72.1
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.2e-181 639.4 473 70.8
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 8.6e-178 627.5 484 70.5
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 1.1e-177 627.1 484 70.5
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 2.1e-176 622.9 484 69.8
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.8e-175 619.8 474 71.1
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 9.2e-172 607.4 485 69.9
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.9e-156 556.6 398 73.9
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 3.2e-156 555.8 398 73.9
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.3e-146 523.9 483 62.9
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.0e-114 417.9 474 52.3
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 1.8e-111 407.1 471 50.3
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.8e-111 407.1 473 51.8
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 3.1e-111 406.4 475 50.9
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 7.7e-110 401.7 471 51.2
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.0e-109 401.4 472 51.1
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 1.3e-109 401.0 472 51.1
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.7e-109 400.6 472 51.1
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.9e-108 397.1 472 50.4
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 3.2e-108 396.4 472 50.0
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 2.7e-107 393.3 472 49.4
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 4.7e-107 392.5 471 48.4
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 1.8e-106 390.6 472 49.4
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.8e-106 390.6 471 49.5
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.3e-106 390.2 470 49.1
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 3.0e-106 389.8 473 48.6
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 5.2e-106 389.0 472 49.2
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 6.7e-106 388.7 473 48.4
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 8.8e-106 388.3 470 48.7
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.2e-105 387.9 467 49.9
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 1.2e-105 387.9 472 50.0
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.5e-105 387.5 470 48.7
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 1.5e-105 387.5 473 49.5
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.4e-105 386.0 472 48.9
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 4.4e-105 386.0 472 48.9
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 7.5e-105 385.2 473 49.3
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 9.7e-105 384.8 473 48.4
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 9.7e-105 384.8 476 49.4
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 9.7e-105 384.8 471 50.1
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.8e-104 383.3 473 47.8
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 3.7e-104 382.9 470 48.1
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 8.3e-104 381.7 471 47.3
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.1e-103 381.3 470 49.4
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 1.4e-103 380.9 470 48.1
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 4.1e-103 379.4 472 48.3
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 5.3e-103 379.0 470 47.4
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 7.0e-103 378.6 470 47.7
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 9.1e-103 378.3 474 47.0
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.2e-102 377.9 473 47.1
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.6e-102 377.5 467 46.5
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 2.0e-102 377.1 466 48.9
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 4.5e-102 375.9 470 48.3
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 4.5e-102 375.9 471 47.8
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 5.9e-102 375.6 473 47.6
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 1.0e-101 374.8 466 48.3
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.0e-101 374.8 471 46.9
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.3e-101 374.4 470 48.3
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 1.3e-101 374.4 488 47.5
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 2.2e-101 373.6 473 46.5
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 2.2e-101 373.6 451 49.7
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 2.9e-101 373.2 471 49.3
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 1.9e-100 370.5 480 49.0
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 3.2e-100 369.8 471 47.8
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 9.4e-100 368.2 472 47.2
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 1.6e-99 367.5 396 53.3
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 2.1e-99 367.1 466 48.5
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.7e-99 366.7 473 46.9
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 2.7e-99 366.7 479 46.8
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 3.6e-99 366.3 472 46.2
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 6.1e-99 365.5 473 45.9
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 8.0e-99 365.2 480 46.9
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.0e-98 364.8 470 46.0
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 1.8e-98 364.0 473 45.7
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 1.8e-98 364.0 479 46.3
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 4.0e-98 362.8 469 47.5
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 4.0e-98 362.8 473 45.9
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 4.0e-98 362.8 473 45.9
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 4.0e-98 362.8 473 45.9
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 5.2e-98 362.5 471 46.3
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 5.2e-98 362.5 477 48.0
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 5.2e-98 362.5 475 46.5
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 6.8e-98 362.1 475 46.5
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 8.8e-98 361.7 440 48.2
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 4.4e-97 359.4 467 47.1
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 5.7e-97 359.0 470 46.6
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 9.8e-97 358.2 406 51.2
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.3e-96 357.8 397 51.4
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 1.7e-96 357.5 469 46.9
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 6.3e-96 355.5 473 45.7
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 2.4e-95 353.6 476 45.6
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 4.1e-95 352.8 432 49.1
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 7.0e-95 352.1 504 44.2
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 2.0e-94 350.5 470 45.3
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 4.2e-92 342.8 465 45.2
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 5.5e-92 342.4 465 45.6
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.8e-91 340.1 395 50.9
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 4.0e-90 336.3 476 45.2
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 3.4e-89 333.2 468 44.9
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 2.2e-88 330.5 476 44.5
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 3.7e-88 329.7 471 44.2
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 2.9e-85 320.1 478 44.1
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 6.6e-85 318.9 394 49.0
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 1.9e-84 317.4 396 47.2
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 3.3e-84 316.6 468 44.7
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 4.3e-84 316.2 472 44.5
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 4.3e-84 316.2 471 44.2
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 7.3e-84 315.5 528 40.7
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 9.5e-84 315.1 493 41.6
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.1e-83 313.9 359 51.0
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 6.4e-80 302.4 356 48.6
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.3e-80 302.0 398 47.2
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 7.3e-76 288.9 282 57.8
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.2e-75 288.1 573 36.3
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 5.2e-74 282.7 318 50.3
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 3.5e-70 270.0 476 38.7
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 3.5e-70 270.0 226 65.0
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 3.9e-69 266.5 288 51.4
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 3.4e-65 253.4 395 40.8
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 5.4e-63 246.1 559 33.5
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.0e-61 241.9 470 38.5
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.1e-55 221.9 354 41.5
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.4e-55 220.7 474 34.2
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 6.0e-54 216.1 406 36.7
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 4.3e-52 209.9 426 35.0
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 3.4e-49 200.3 258 46.5
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 1.3e-48 198.4 246 47.2
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 3.5e-46 190.3 222 49.1
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 9.9e-41 172.2 480 29.6
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 9.3e-39 165.6 268 40.3
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 1.1e-36 158.7 480 29.8
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 4.5e-33 146.7 203 42.9
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 2.6e-25 120.9 438 29.7
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.9e-23 114.8 198 36.9
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 7.9e-22 109.4 191 38.7
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.0e-17 94.7 277 27.4
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 3.2e-07 60.8 75 49.3
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 7.9e-06 56.2 78 43.6


User provided reference genes

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