Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.7e-52 208.4 104 100.0
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 5.8e-31 137.5 78 84.6
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 5.8e-31 137.5 78 84.6
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 5.8e-31 137.5 78 84.6
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 7.6e-31 137.1 78 84.6
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.0e-30 136.7 78 84.6
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.3e-30 136.3 78 84.6
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.3e-30 136.3 78 84.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.3e-30 136.3 78 84.6
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.7e-30 136.0 78 83.3
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.9e-30 135.2 78 84.6
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 3.8e-30 134.8 78 83.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 4.9e-30 134.4 78 83.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.9e-30 134.4 78 83.3
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 8.4e-30 133.7 78 82.1
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 8.4e-30 133.7 78 82.1
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.4e-29 132.9 78 80.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 1.4e-29 132.9 78 83.3
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 2.5e-29 132.1 78 79.5
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 4.2e-29 131.3 78 79.5
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 7.1e-29 130.6 78 78.2
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 7.1e-29 130.6 78 78.2
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 7.1e-29 130.6 78 79.5
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 9.3e-29 130.2 78 78.2
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.3e-29 130.2 78 78.2
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.3e-29 130.2 78 78.2
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.2e-28 129.8 77 81.8
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.6e-28 129.4 78 78.2
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.6e-28 129.4 78 79.5
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.1e-28 129.0 78 78.2
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 2.1e-28 129.0 78 79.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.1e-28 129.0 78 78.2
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 3.5e-28 128.3 78 78.2
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.6e-28 127.9 78 76.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 4.6e-28 127.9 78 78.2
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 6.0e-28 127.5 78 78.2
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.0e-28 127.5 78 76.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 6.0e-28 127.5 78 79.5
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 7.9e-28 127.1 78 75.6
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 7.9e-28 127.1 78 74.4
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.0e-27 126.7 78 78.2
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.3e-27 126.3 78 79.5
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.3e-27 126.3 78 80.8
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.8e-27 125.9 78 78.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.8e-27 125.9 78 76.9
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.8e-27 125.9 78 76.9
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 3.0e-27 125.2 78 76.9
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 3.0e-27 125.2 78 76.9
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.0e-27 125.2 78 76.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 3.0e-27 125.2 78 76.9
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.9e-27 124.8 78 76.9
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 3.9e-27 124.8 78 79.5
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 5.1e-27 124.4 78 73.1
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 5.1e-27 124.4 78 79.5
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 5.1e-27 124.4 78 76.9
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 6.7e-27 124.0 77 77.9
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 8.7e-27 123.6 78 76.9
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 8.7e-27 123.6 78 76.9
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 8.7e-27 123.6 78 76.9
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 8.7e-27 123.6 78 76.9
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.1e-26 123.2 78 73.1
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.9e-26 122.5 78 74.4
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.9e-26 122.5 78 75.6
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.5e-26 122.1 77 76.6
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 3.3e-26 121.7 78 75.6
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 5.7e-26 120.9 78 73.1
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 7.4e-26 120.6 78 73.1
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 7.4e-26 120.6 78 73.1
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 7.4e-26 120.6 78 75.6
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 9.6e-26 120.2 78 71.8
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 1.6e-25 119.4 78 74.4
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.8e-25 118.6 78 74.4
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 3.7e-25 118.2 72 79.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 3.7e-25 118.2 78 73.1
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 8.2e-25 117.1 78 73.1
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 8.2e-25 117.1 78 74.4
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.1e-24 116.7 78 73.1
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.4e-24 116.3 78 73.1
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 2.4e-24 115.5 78 74.4
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.4e-24 115.5 78 70.5
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 3.1e-24 115.2 78 75.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.1e-24 115.2 78 71.8
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 5.3e-24 114.4 78 73.1
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 1.2e-23 113.2 78 71.8
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.2e-23 113.2 78 70.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.6e-23 112.1 78 69.2
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.0e-22 110.2 78 74.4
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.3e-22 109.8 78 73.1
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-22 109.8 78 70.5
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-22 109.8 78 70.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 1.7e-22 109.4 78 69.2
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.7e-22 109.4 78 69.2
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 3.8e-22 108.2 78 69.2
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 8.4e-22 107.1 78 69.2
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.5e-21 105.5 78 67.9
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.6e-20 102.8 81 72.8
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.1e-20 102.4 81 71.6
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.5e-20 101.7 78 69.2
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.6e-20 101.3 66 74.2
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.0e-19 100.1 78 65.4
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 6.7e-19 97.4 78 66.7
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.6e-15 85.5 78 57.7
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.0e-14 83.6 72 59.7
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 9.4e-13 77.0 96 49.0
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 2.2e-09 65.9 57 57.9


User provided reference genes

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