Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G7230 Aethionema arabicum HOM05D006959 ORTHO05D008808 2.0e-124 449.1 234 100.0
Thhalv10019109m.g Eutrema salsugineum HOM05D006959 ORTHO05D008808 2.2e-78 296.2 241 69.7
Carub.0002s2410 Capsella rubella HOM05D006959 ORTHO05D008808 1.1e-77 293.9 239 70.3
Sp5g32400 Schrenkiella parvula HOM05D006959 ORTHO05D008808 3.0e-75 285.8 234 68.4
THA.LOC104813687 Tarenaya hassleriana HOM05D006959 ORTHO05D008808 2.8e-73 279.3 236 64.4
AL2G37400 Arabidopsis lyrata HOM05D006959 ORTHO05D008808 4.8e-73 278.5 233 67.8
AT1G77230 Arabidopsis thaliana HOM05D006959 ORTHO05D008808 2.0e-71 273.1 239 66.1
BcaC08g45484 Brassica carinata HOM05D006959 ORTHO05D008808 2.4e-69 266.2 232 65.1
A08p07140 Brassica napus HOM05D006959 ORTHO05D008808 1.1e-66 257.3 232 62.9
BraA08t32726Z Brassica rapa HOM05D006959 ORTHO05D008808 1.1e-66 257.3 232 62.9
CARHR070700 Cardamine hirsuta HOM05D006959 ORTHO05D008808 5.6e-66 255.0 232 62.9
C06p31380 Brassica napus HOM05D006959 ORTHO05D008808 9.6e-66 254.2 232 62.5
BolC6t38274H Brassica oleracea HOM05D006959 ORTHO05D008808 1.1e-64 250.8 232 62.1
BcaB02g07099 Brassica carinata HOM05D006959 ORTHO05D008808 8.2e-57 224.6 237 56.5
Cpa.g.sc64.158 Carica papaya HOM05D006959 ORTHO05D008808 1.5e-55 220.3 233 53.6
TWI32G1355 Tripterygium wilfordii HOM05D006959 ORTHO05D008808 2.6e-55 219.5 242 56.2
Ciclev10002542m.g Citrus clementina HOM05D006959 ORTHO05D008808 2.1e-52 209.9 234 53.4
Thecc.08G134700 Theobroma cacao HOM05D006959 ORTHO05D008808 1.8e-51 206.8 242 50.0
ClCG08G006070 Citrullus lanatus HOM05D006959 ORTHO05D008808 2.3e-51 206.5 252 51.2
Gohir.A05G238900 Gossypium hirsutum HOM05D006959 ORTHO05D008808 3.0e-51 206.1 238 52.1
Manes.18G084200 Manihot esculenta HOM05D006959 ORTHO05D008808 3.9e-51 205.7 234 51.3
Duzib093G2176 Durio zibethinus HOM05D006959 ORTHO05D008808 9.7e-50 201.1 239 51.5
Atru.chr13.1599 Acer truncatum HOM05D006959 ORTHO05D008808 2.2e-49 199.9 234 50.9
Cfa018414 Carpinus fangiana HOM05D006959 ORTHO05D008808 6.3e-49 198.4 242 49.6
Gorai.009G249600 Gossypium raimondii HOM05D006959 ORTHO05D008808 6.3e-49 198.4 238 50.8
Gohir.D05G240800 Gossypium hirsutum HOM05D006959 ORTHO05D008808 1.1e-48 197.6 238 50.8
MD15G1131600 Malus domestica HOM05D006959 ORTHO05D008808 5.3e-48 195.3 234 51.3
Potri.002G076700 Populus trichocarpa HOM05D006959 ORTHO05D008808 5.3e-48 195.3 239 51.0
CiPaw.16G022000 Carya illinoinensis HOM05D006959 ORTHO05D008808 1.5e-47 193.7 242 48.8
PGR042G0886 Punica granatum HOM05D006959 ORTHO05D008808 1.5e-47 193.7 243 48.1
Sed0020251 Sechium edule HOM05D006959 ORTHO05D008808 3.4e-47 192.6 236 50.0
Lj4A666T17 Lonicera japonica HOM05D006959 ORTHO05D008808 4.5e-47 192.2 237 48.5
COL.COLO4_32963 Corchorus olitorius HOM05D006959 ORTHO05D008808 2.2e-46 189.9 236 49.6
CsaV3_6G033990 Cucumis sativus L. HOM05D006959 ORTHO05D008808 2.9e-46 189.5 234 50.4
RcHm_v2.0_Chr6g0297021 Rosa chinensis HOM05D006959 ORTHO05D008808 6.5e-46 188.3 236 47.0
FvH4_2g28060 Fragaria vesca HOM05D006959 ORTHO05D008808 1.1e-45 187.6 237 46.4
Lj4A663T33 Lonicera japonica HOM05D006959 ORTHO05D008808 1.4e-45 187.2 233 48.1
MELO3C008461.2 Cucumis melo HOM05D006959 ORTHO05D008808 1.9e-45 186.8 248 49.2
FAN27G3284 Fragaria x ananassa HOM05D006959 ORTHO05D008808 1.9e-45 186.8 237 46.0
FAN24G0315 Fragaria x ananassa HOM05D006959 ORTHO05D008808 2.5e-45 186.4 237 46.4
Oeu026374.1 Olea europaea HOM05D006959 ORTHO05D008808 4.2e-45 185.7 239 48.5
MSTRG.1406 Avicennia marina HOM05D006959 ORTHO05D008808 5.5e-45 185.3 238 46.6
Nn1g08935 Nelumbo nucifera HOM05D006959 ORTHO05D008808 5.5e-45 185.3 237 50.2
Lsat_1_v5_gn_1_10340 Lactuca sativa HOM05D006959 ORTHO05D008808 1.6e-44 183.7 238 48.7
Haze_17647 Corylus avellana HOM05D006959 ORTHO05D008808 3.6e-44 182.6 240 48.3
Hund17359 Selenicereus undatus HOM05D006959 ORTHO05D008808 3.6e-44 182.6 231 48.5
GSVIVG01008793001 Vitis vinifera HOM05D006959 ORTHO05D008808 3.6e-44 182.6 168 59.5
Migut.C01073 Erythranthe guttata HOM05D006959 ORTHO05D008808 6.1e-44 181.8 238 47.1
QL09p031824 Quercus lobata HOM05D006959 ORTHO05D008808 7.9e-44 181.4 240 47.5
SalBow7G4180 Salvia bowleyana HOM05D006959 ORTHO05D008808 7.9e-44 181.4 239 47.7
AUR62007695 Chenopodium quinoa HOM05D006959 ORTHO05D008808 1.0e-43 181.0 244 47.5
Glyma.13G035500 Glycine max HOM05D006959 ORTHO05D008808 1.0e-43 181.0 232 47.8
Os02g0553500 Oryza sativa ssp. japonica HOM05D006959 ORTHO05D008808 1.0e-43 181.0 232 48.3
TAR381G0659 Trochodendron aralioides HOM05D006959 ORTHO05D008808 1.0e-43 181.0 234 46.6
Cc10_g14010 Coffea canephora HOM05D006959 ORTHO05D008808 1.4e-43 180.6 235 46.8
Hma1.2p1_0159F.1_g070330 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 1.4e-43 180.6 235 46.4
AUR62013448 Chenopodium quinoa HOM05D006959 ORTHO05D008808 1.8e-43 180.3 245 46.5
QL09p031413 Quercus lobata HOM05D006959 ORTHO05D008808 3.0e-43 179.5 240 47.1
Eucgr.F03861 Eucalyptus grandis HOM05D006959 ORTHO05D008808 6.7e-43 178.3 243 47.3
VMungo0647G0259 Vigna mungo HOM05D006959 ORTHO05D008808 1.5e-42 177.2 232 46.6
Sabra02G0060200 Salix brachista HOM05D006959 ORTHO05D008808 2.6e-42 176.4 284 42.3
HanXRQChr02g0045531 Helianthus annuus HOM05D006959 ORTHO05D008808 5.7e-42 175.3 238 44.1
EL10Ac1g01371 Beta vulgaris HOM05D006959 ORTHO05D008808 9.7e-42 174.5 253 44.3
Phvul.001G066600 Phaseolus vulgaris HOM05D006959 ORTHO05D008808 1.7e-41 173.7 234 47.4
arahy.Tifrunner.gnm1.ann1.P1MCWD Arachis hypogaea HOM05D006959 ORTHO05D008808 3.7e-41 172.6 232 47.4
PGSC0003DMG402018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 3.7e-41 172.6 233 45.5
CAN.G46.11 Capsicum annuum HOM05D006959 ORTHO05D008808 4.8e-41 172.2 176 53.4
Zm00001eb181980 Zea mays HOM05D006959 ORTHO05D008808 8.2e-41 171.4 232 47.0
Sopen04g026100 Solanum pennellii HOM05D006959 ORTHO05D008808 1.1e-40 171.0 233 44.6
Aqoxy6G00289 Aquilegia oxysepala HOM05D006959 ORTHO05D008808 1.8e-40 170.2 163 55.2
PGSC0003DMG403018005 Solanum tuberosum HOM05D006959 ORTHO05D008808 2.4e-40 169.9 233 44.2
Peaxi162Scf00066g00072 Petunia axillaris HOM05D006959 ORTHO05D008808 2.0e-39 166.8 233 43.8
CANSAT64G0796 Cannabis sativa HOM05D006959 ORTHO05D008808 5.9e-39 165.2 237 41.8
CDE06G1932 Ceratophyllum demersum HOM05D006959 ORTHO05D008808 1.0e-38 164.5 225 44.9
PSO170G0856 Papaver somniferum HOM05D006959 ORTHO05D008808 1.0e-38 164.5 165 52.1
Nitab4.5_0002625g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 2.2e-38 163.3 236 43.6
MBI03_g13506_MAGBIO Magnolia biondii HOM05D006959 ORTHO05D008808 3.8e-38 162.5 250 44.4
PSO528G0249 Papaver somniferum HOM05D006959 ORTHO05D008808 3.2e-37 159.5 249 40.6
Lj1g0023549 Lotus japonicus HOM05D006959 ORTHO05D008808 7.2e-37 158.3 239 43.9
FAN20G3215 Fragaria x ananassa HOM05D006959 ORTHO05D008808 3.6e-36 156.0 237 42.2
Actinidia24726 Actinidia chinensis HOM05D006959 ORTHO05D008808 4.7e-36 155.6 205 45.9
Nitab4.5_0008327g0010 Nicotiana tabacum HOM05D006959 ORTHO05D008808 4.7e-36 155.6 260 39.6
CSS0019542 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 3.0e-35 152.9 236 41.9
Lalb_Chr04g0253591 Lupinus albus HOM05D006959 ORTHO05D008808 3.0e-35 152.9 241 42.3
arahy.Tifrunner.gnm1.ann1.84IAJ5 Arachis hypogaea HOM05D006959 ORTHO05D008808 5.2e-35 152.1 150 56.7
HPP92_016131 Vanilla planifolia HOM05D006959 ORTHO05D008808 1.5e-34 150.6 236 40.7
ATR0584G163 Amborella trichopoda HOM05D006959 ORTHO05D008808 1.8e-32 143.7 233 40.8
Medtr1g029720 Medicago truncatula HOM05D006959 ORTHO05D008808 1.8e-32 143.7 234 42.3
Hma1.2p1_0159F.1_g070340 Hydrangea macrophylla HOM05D006959 ORTHO05D008808 4.1e-32 142.5 224 42.0
Actinidia15201 Actinidia chinensis HOM05D006959 ORTHO05D008808 7.7e-31 138.3 241 39.4
Glyma.14G156700 Glycine max HOM05D006959 ORTHO05D008808 1.5e-29 134.0 227 39.6
Ca_12642_v3 Cicer arietinum L. HOM05D006959 ORTHO05D008808 4.4e-26 122.5 249 38.2
Solyc04g058200.3 Solanum lycopersicum HOM05D006959 ORTHO05D008808 7.5e-26 121.7 133 50.4
Dinv27258 Davidia involucrata HOM05D006959 ORTHO05D008808 1.7e-25 120.6 131 51.9
DCAR_028201 Daucus carota HOM05D006959 ORTHO05D008808 4.5e-23 112.5 234 36.8
Psat6g040840 Pisum sativum HOM05D006959 ORTHO05D008808 5.0e-22 109.0 175 42.3
SGA_v2.0_scaffold52G18911 Striga asiatica HOM05D006959 ORTHO05D008808 2.5e-21 106.7 135 49.6
CSS0009415 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 2.3e-19 100.1 142 44.4
CSS0036249 Camellia sinensis var. sinensis HOM05D006959 ORTHO05D008808 1.5e-18 97.4 139 44.6
Prupe.1G487500 Prunus persica HOM05D006959 ORTHO05D008808 1.7e-17 94.0 72 62.5
RcHm_v2.0_Chr6g0296961 Rosa chinensis HOM05D006959 ORTHO05D008808 1.1e-16 91.3 87 54.0
Sc26g0002850 Simmondsia chinensis HOM05D006959 ORTHO05D008808 2.4e-16 90.1 68 64.7
TPR.G879 Trifolium pratense HOM05D006959 ORTHO05D008808 5.9e-15 85.5 70 57.1
Mapoly0050s0106 Marchantia polymorpha HOM05D006959 ORTHO05D008808 1.7e-14 84.0 141 41.8
RcHm_v2.0_Chr6g0296981 Rosa chinensis HOM05D006959 ORTHO05D008808 2.9e-14 83.2 55 72.7
FAN24G1784 Fragaria x ananassa HOM05D006959 ORTHO05D008808 5.2e-11 72.4 47 68.1
Cre12.g510034 Chlamydomonas reinhardtii HOM05D006959 ORTHO05D008808 9.8e-10 68.2 122 36.9
SEGI_04582 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 7.0e-08 62.0 69 42.0
SEGI_05118 Sequoiadendron giganteum HOM05D006959 ORTHO05D008808 2.0e-07 60.5 69 42.0
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 2.7e-07 60.1 169 27.2
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 5.9e-07 58.9 169 25.4
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 1.0e-06 58.2 174 27.0
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 1.7e-06 57.4 174 27.0
BcaC03g16447 Brassica carinata HOM05D005920 ORTHO05D007211 3.8e-06 56.2 174 28.2
Sp6g09620 Schrenkiella parvula HOM05D005920 ORTHO05D007211 3.8e-06 56.2 165 26.1
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 5.0e-06 55.8 174 26.4
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 5.0e-06 55.8 174 26.4


User provided reference genes

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