Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G70 Aethionema arabicum HOM05D006831 ORTHO05D008256 7.3e-189 663.7 324 100.0
AT1G79760 Arabidopsis thaliana HOM05D006831 ORTHO05D008256 1.3e-84 317.4 321 56.4
Carub.0002s2775 Capsella rubella HOM05D006831 ORTHO05D008256 7.0e-83 311.6 322 55.9
AL2G41800 Arabidopsis lyrata HOM05D006831 ORTHO05D008256 9.2e-83 311.2 329 55.9
CARHR262750 Cardamine hirsuta HOM05D006831 ORTHO05D008256 3.9e-81 305.8 317 54.6
A07p26290 Brassica napus HOM05D006831 ORTHO05D008256 2.5e-80 303.1 334 54.8
BraA07t30273Z Brassica rapa HOM05D006831 ORTHO05D008256 2.5e-80 303.1 334 54.8
BolC6t38038H Brassica oleracea HOM05D006831 ORTHO05D008256 1.6e-79 300.4 329 55.3
Thhalv10018887m.g Eutrema salsugineum HOM05D006831 ORTHO05D008256 1.6e-79 300.4 334 54.5
C06p28690 Brassica napus HOM05D006831 ORTHO05D008256 8.0e-79 298.1 330 54.5
Sp5g36010 Schrenkiella parvula HOM05D006831 ORTHO05D008256 3.4e-77 292.7 332 53.6
BcaC08g45266 Brassica carinata HOM05D006831 ORTHO05D008256 3.9e-73 279.3 288 56.2
Duzib235G1306 Durio zibethinus HOM05D006831 ORTHO05D008256 1.6e-50 204.1 368 38.3
Dinv30442 Davidia involucrata HOM05D006831 ORTHO05D008256 2.7e-50 203.4 373 38.1
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 2.7e-50 203.4 372 38.2
Gohir.D10G067400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 1.0e-49 201.4 378 37.8
Gohir.A10G066100 Gossypium hirsutum HOM05D006831 ORTHO05D008256 2.3e-49 200.3 374 38.0
Gorai.011G071900 Gossypium raimondii HOM05D006831 ORTHO05D008256 3.0e-49 199.9 374 38.0
Hma1.2p1_0430F.1_g151466 Hydrangea macrophylla HOM05D006831 ORTHO05D008256 3.9e-49 199.5 381 37.3
vmacro18857 Vaccinium macrocarpon HOM05D006831 ORTHO05D008256 1.1e-48 198.0 374 36.6
COL.COLO4_30498 Corchorus olitorius HOM05D006831 ORTHO05D008256 1.5e-48 197.6 380 36.1
Cfa003655 Carpinus fangiana HOM05D006831 ORTHO05D008256 2.5e-48 196.8 365 37.0
Gohir.A02G117700 Gossypium hirsutum HOM05D006831 ORTHO05D008256 4.3e-48 196.1 376 36.7
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 1.3e-47 194.5 377 36.1
Gorai.003G062200 Gossypium raimondii HOM05D006831 ORTHO05D008256 1.3e-47 194.5 380 36.6
THA.LOC104801499 Tarenaya hassleriana HOM05D006831 ORTHO05D008256 1.3e-47 194.5 321 40.2
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 1.6e-47 194.1 370 37.8
Prupe.3G060100 Prunus persica HOM05D006831 ORTHO05D008256 1.6e-47 194.1 372 35.8
TAR626G1633 Trochodendron aralioides HOM05D006831 ORTHO05D008256 2.8e-47 193.4 378 36.5
Ciclev10025849m.g Citrus clementina HOM05D006831 ORTHO05D008256 4.8e-47 192.6 378 36.8
Rhsim08G0227100 Rhododendron simsii HOM05D006831 ORTHO05D008256 4.8e-47 192.6 369 36.9
ECA247G2417 Erigeron canadensis HOM05D006831 ORTHO05D008256 6.2e-47 192.2 361 37.7
PGR102G2866 Punica granatum HOM05D006831 ORTHO05D008256 8.1e-47 191.8 348 38.2
Gohir.D03G058400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 1.1e-46 191.4 380 36.3
RcHm_v2.0_Chr2g0140341 Rosa chinensis HOM05D006831 ORTHO05D008256 1.1e-46 191.4 375 34.7
CSS0014632 Camellia sinensis var. sinensis HOM05D006831 ORTHO05D008256 2.4e-46 190.3 373 36.2
CiPaw.01G232000 Carya illinoinensis HOM05D006831 ORTHO05D008256 4.0e-46 189.5 384 35.2
Lsat_1_v5_gn_1_36980 Lactuca sativa HOM05D006831 ORTHO05D008256 6.9e-46 188.7 381 35.4
FAN05G2796 Fragaria x ananassa HOM05D006831 ORTHO05D008256 2.0e-45 187.2 374 35.0
Eucgr.F03071 Eucalyptus grandis HOM05D006831 ORTHO05D008256 2.6e-45 186.8 388 36.3
VMungo0331G1511 Vigna mungo HOM05D006831 ORTHO05D008256 2.6e-45 186.8 344 36.3
Haze_06254 Corylus avellana HOM05D006831 ORTHO05D008256 3.4e-45 186.4 334 35.9
Phvul.010G145700 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 3.4e-45 186.4 365 36.2
QL05p020342 Quercus lobata HOM05D006831 ORTHO05D008256 4.5e-45 186.0 377 35.3
FvH4_6g32300 Fragaria vesca HOM05D006831 ORTHO05D008256 5.8e-45 185.7 374 34.8
Glyma.07G015900 Glycine max HOM05D006831 ORTHO05D008256 5.8e-45 185.7 367 36.0
arahy.Tifrunner.gnm1.ann1.U3LBHC Arachis hypogaea HOM05D006831 ORTHO05D008256 9.9e-45 184.9 375 36.3
DCAR_016191 Daucus carota HOM05D006831 ORTHO05D008256 1.3e-44 184.5 366 36.3
TWI12G0407 Tripterygium wilfordii HOM05D006831 ORTHO05D008256 1.3e-44 184.5 378 34.4
Cpa.g.sc109.6 Carica papaya HOM05D006831 ORTHO05D008256 2.2e-44 183.7 278 42.8
Glyma.08G201400 Glycine max HOM05D006831 ORTHO05D008256 2.2e-44 183.7 371 35.8
arahy.Tifrunner.gnm1.ann1.4LXS91 Arachis hypogaea HOM05D006831 ORTHO05D008256 2.9e-44 183.3 376 36.2
FAN14G1280 Fragaria x ananassa HOM05D006831 ORTHO05D008256 2.9e-44 183.3 362 35.1
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 4.9e-44 182.6 373 36.5
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 4.9e-44 182.6 373 36.5
FAN02G3719 Fragaria x ananassa HOM05D006831 ORTHO05D008256 4.9e-44 182.6 339 36.0
Manes.11G034300 Manihot esculenta HOM05D006831 ORTHO05D008256 4.9e-44 182.6 279 40.9
AUR62031907 Chenopodium quinoa HOM05D006831 ORTHO05D008256 8.4e-44 181.8 371 35.0
Cc04_g02630 Coffea canephora HOM05D006831 ORTHO05D008256 1.9e-43 180.6 377 33.7
Lalb_Chr04g0262951 Lupinus albus HOM05D006831 ORTHO05D008256 5.4e-43 179.1 305 37.7
Potri.001G189400 Populus trichocarpa HOM05D006831 ORTHO05D008256 5.4e-43 179.1 375 33.9
Medtr8g014330 Medicago truncatula HOM05D006831 ORTHO05D008256 7.1e-43 178.7 376 35.1
MD09G1204500 Malus domestica HOM05D006831 ORTHO05D008256 1.2e-42 177.9 378 34.1
Sabra01G0151300 Salix brachista HOM05D006831 ORTHO05D008256 6.0e-42 175.6 377 33.2
Oeu050599.1 Olea europaea HOM05D006831 ORTHO05D008256 7.9e-42 175.3 383 32.4
Lj5A54G57 Lonicera japonica HOM05D006831 ORTHO05D008256 1.0e-41 174.9 364 36.0
Lj3g0006655 Lotus japonicus HOM05D006831 ORTHO05D008256 1.0e-41 174.9 374 35.6
MSTRG.11030 Avicennia marina HOM05D006831 ORTHO05D008256 1.3e-41 174.5 380 31.3
CANSAT56G0873 Cannabis sativa HOM05D006831 ORTHO05D008256 1.3e-41 174.5 381 33.9
EL10Ac9g21213 Beta vulgaris HOM05D006831 ORTHO05D008256 5.1e-41 172.6 378 34.7
CsaV3_3G023650 Cucumis sativus L. HOM05D006831 ORTHO05D008256 5.1e-41 172.6 379 34.8
Sed0018864 Sechium edule HOM05D006831 ORTHO05D008256 8.7e-41 171.8 358 35.5
TAR383G0884 Trochodendron aralioides HOM05D006831 ORTHO05D008256 8.7e-41 171.8 375 34.9
CiPaw.02G146100 Carya illinoinensis HOM05D006831 ORTHO05D008256 1.5e-40 171.0 374 34.2
Peaxi162Scf00038g00918 Petunia axillaris HOM05D006831 ORTHO05D008256 1.5e-40 171.0 376 33.8
Ah.01g022020 Amaranthus hybridus HOM05D006831 ORTHO05D008256 3.3e-40 169.9 286 38.5
TPR.G29201 Trifolium pratense HOM05D006831 ORTHO05D008256 3.3e-40 169.9 373 35.1
AUR62022199 Chenopodium quinoa HOM05D006831 ORTHO05D008256 5.6e-40 169.1 285 37.9
HanXRQChr10g0313251 Helianthus annuus HOM05D006831 ORTHO05D008256 9.6e-40 168.3 376 33.5
HanXRQChr02g0032201 Helianthus annuus HOM05D006831 ORTHO05D008256 2.1e-39 167.2 380 33.2
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 2.1e-39 167.2 374 34.8
Ca_23268_v3 Cicer arietinum L. HOM05D006831 ORTHO05D008256 4.8e-39 166.0 310 35.5
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 8.1e-39 165.2 376 31.9
Psat4g221040 Pisum sativum HOM05D006831 ORTHO05D008256 3.1e-38 163.3 289 39.4
Lsat_1_v5_gn_5_134400 Lactuca sativa HOM05D006831 ORTHO05D008256 9.0e-38 161.8 289 36.0
Potri.011G047800 Populus trichocarpa HOM05D006831 ORTHO05D008256 9.0e-38 161.8 382 33.0
Aqoxy7G01449 Aquilegia oxysepala HOM05D006831 ORTHO05D008256 3.4e-37 159.8 377 33.2
Sabra11G0033200 Salix brachista HOM05D006831 ORTHO05D008256 3.4e-37 159.8 374 34.2
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 4.5e-37 159.5 377 31.3
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 7.6e-37 158.7 380 30.8
Nn6g35309 Nelumbo nucifera HOM05D006831 ORTHO05D008256 1.0e-36 158.3 379 32.2
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 1.0e-36 158.3 377 31.6
SalBow2G3477 Salvia bowleyana HOM05D006831 ORTHO05D008256 1.4e-35 154.5 283 35.7
Phvul.005G166600 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 6.0e-34 149.1 351 33.9
VMungo1080G0645 Vigna mungo HOM05D006831 ORTHO05D008256 1.3e-33 147.9 360 32.5
CARHR262770 Cardamine hirsuta HOM05D006831 ORTHO05D008256 7.4e-32 142.1 99 66.7
PSO210G4514 Papaver somniferum HOM05D006831 ORTHO05D008256 3.7e-31 139.8 414 30.0
PSO210G6112 Papaver somniferum HOM05D006831 ORTHO05D008256 1.1e-30 138.3 409 28.9
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 1.4e-27 127.9 374 28.9
SGA_v2.0_scaffold66G22536 Striga asiatica HOM05D001613 ORTHO05D008256 1.9e-24 117.5 326 29.4
Os01g0744200 Oryza sativa ssp. japonica HOM05D006831 ORTHO05D008256 5.7e-24 115.9 306 30.7
MELO3C012995.2 Cucumis melo HOM05D006831 ORTHO05D008256 9.7e-24 115.2 338 31.4
Actinidia32697 Actinidia chinensis HOM05D006831 ORTHO05D008256 3.1e-22 110.2 236 36.0
Zm00001eb153550 Zea mays HOM05D006831 ORTHO05D008256 5.3e-22 109.4 366 29.2
CARHR074700 Cardamine hirsuta HOM05D006831 ORTHO05D008256 1.2e-21 108.2 116 51.7
GSVIVG01017000001 Vitis vinifera HOM05D006831 ORTHO05D008256 2.0e-21 107.5 234 34.2
VMungo0331G1726 Vigna mungo HOM05D006831 ORTHO05D008256 1.3e-20 104.8 247 32.4
Nitab4.5_0009505g0020 Nicotiana tabacum HOM05D006831 ORTHO05D008256 1.6e-18 97.8 98 45.9
HPP92_006371 Vanilla planifolia HOM05D006831 ORTHO05D008256 2.7e-18 97.1 372 26.6
Hund00686 Selenicereus undatus HOM05D006831 ORTHO05D008256 1.4e-17 94.7 149 43.6
Migut.I00901 Erythranthe guttata HOM05D006831 ORTHO05D008256 1.1e-16 91.7 209 30.1
QL07p032560 Quercus lobata HOM05D006353 ORTHO05D007993 6.9e-14 82.4 305 28.2
Sabra04G0151900 Salix brachista HOM05D006353 ORTHO05D007993 3.4e-13 80.1 275 27.6
ATR0705G209 Amborella trichopoda HOM05D006831 ORTHO05D008256 5.9e-13 79.3 93 43.0
TPR.G25775 Trifolium pratense HOM05D006831 ORTHO05D008256 1.3e-12 78.2 117 40.2
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 8.5e-12 75.5 353 26.1
Gorai.011G129000 Gossypium raimondii HOM05D006353 ORTHO05D007993 2.5e-11 73.9 284 27.8
MSTRG.18951 Avicennia marina HOM05D006353 ORTHO05D007993 3.2e-11 73.6 275 26.5
Haze_02695 Corylus avellana HOM05D006831 ORTHO05D008256 3.2e-11 73.6 51 62.7
Migut.J00057 Erythranthe guttata HOM05D006353 ORTHO05D007993 7.2e-11 72.4 271 26.6
Potri.016G134500 Populus trichocarpa HOM05D006353 ORTHO05D007993 7.2e-11 72.4 259 27.0
GSVIVG01030203001 Vitis vinifera HOM05D006353 ORTHO05D007993 7.2e-11 72.4 283 26.5
Gohir.A10G149700 Gossypium hirsutum HOM05D006353 ORTHO05D007993 1.6e-10 71.2 283 27.6
Dinv25324 Davidia involucrata HOM05D006353 ORTHO05D007993 2.1e-10 70.9 282 27.3
vmacro20360 Vaccinium macrocarpon HOM05D006353 ORTHO05D007993 2.1e-10 70.9 281 28.1
AUR62006369 Chenopodium quinoa HOM05D006353 ORTHO05D007993 3.6e-10 70.1 359 25.9
AUR62029702 Chenopodium quinoa HOM05D006353 ORTHO05D007993 4.7e-10 69.7 270 27.4
Ah.08g209640 Amaranthus hybridus HOM05D006353 ORTHO05D007993 7.9e-10 68.9 271 26.9
Gohir.D10G117100 Gossypium hirsutum HOM05D006353 ORTHO05D007993 1.0e-09 68.6 283 27.2
Haze_21157 Corylus avellana HOM05D006353 ORTHO05D007993 1.4e-09 68.2 277 26.0
Sc15g0002090 Simmondsia chinensis HOM05D006831 ORTHO05D008256 1.4e-09 68.2 87 40.2
Sc07g0005810 Simmondsia chinensis HOM05D006353 ORTHO05D007993 1.8e-09 67.8 287 25.8
Atru.chr8.2382 Acer truncatum HOM05D006353 ORTHO05D007993 5.1e-09 66.2 290 26.9
Actinidia11518 Actinidia chinensis HOM05D006353 ORTHO05D007993 6.7e-09 65.9 351 25.9
Nn2g10337 Nelumbo nucifera HOM05D006353 ORTHO05D007993 1.1e-08 65.1 285 24.2
Rhsim05G0229500 Rhododendron simsii HOM05D006353 ORTHO05D007993 1.1e-08 65.1 279 26.2
Oeu026960.1 Olea europaea HOM05D006353 ORTHO05D007993 3.3e-08 63.5 284 26.4
Hund19788 Selenicereus undatus HOM05D006353 ORTHO05D007993 4.4e-08 63.2 271 26.6
Thecc.04G154100 Theobroma cacao HOM05D006353 ORTHO05D007993 4.4e-08 63.2 360 27.5
Duzib212G0771 Durio zibethinus HOM05D006353 ORTHO05D007993 9.7e-08 62.0 349 26.1
Os01g0823400 Oryza sativa ssp. japonica HOM05D006353 ORTHO05D007993 9.7e-08 62.0 365 25.5
Cfa017056 Carpinus fangiana HOM05D006353 ORTHO05D007993 2.8e-07 60.5 289 26.0
Dinv11379 Davidia involucrata HOM05D006353 ORTHO05D007993 3.7e-07 60.1 173 29.5
PSO339G6092 Papaver somniferum HOM05D006353 ORTHO05D007993 3.7e-07 60.1 381 21.8
Duzib151G0311 Durio zibethinus HOM05D006353 ORTHO05D007993 6.3e-07 59.3 269 26.4
PSO384G2070 Papaver somniferum HOM05D006353 ORTHO05D007993 2.4e-06 57.4 378 22.5
RcHm_v2.0_Chr3g0460831 Rosa chinensis HOM05D006353 ORTHO05D007993 2.4e-06 57.4 263 25.5


User provided reference genes

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