Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G6850 Aethionema arabicum HOM05D005242 ORTHO05D006778 0.0e+00 5479.1 3368 100.0
AT1G76780 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 2.3e-83 316.6 2700 26.6
A02p20890 Brassica napus HOM05D005242 ORTHO05D018625 2.9e-54 219.9 3938 25.7
CARHR070310 Cardamine hirsuta HOM05D005242 ORTHO05D006778 3.2e-53 216.5 143 72.0
BraA02t07120Z Brassica rapa HOM05D005242 ORTHO05D018625 7.9e-52 211.8 3790 27.6
AT1G76770 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 1.0e-51 211.5 142 71.8
BraA02t07119Z Brassica rapa HOM05D005242 ORTHO05D006778 1.8e-51 210.7 144 68.1
C02p32790 Brassica napus HOM05D005242 ORTHO05D006778 1.5e-50 207.6 144 67.4
AL2G36920 Arabidopsis lyrata HOM05D005242 ORTHO05D006778 1.9e-50 207.2 2229 26.6
BcaC03g15701 Brassica carinata HOM05D005242 ORTHO05D006778 1.9e-50 207.2 144 67.4
A02p20880 Brassica napus HOM05D005242 ORTHO05D006778 3.3e-50 206.5 144 66.0
COL.COLO4_08566 Corchorus olitorius HOM05D005242 ORTHO05D006778 4.3e-50 206.1 144 66.7
Carub.0002s2368 Capsella rubella HOM05D005242 ORTHO05D006778 5.7e-50 205.7 139 68.3
BcaB05g25010 Brassica carinata HOM05D005242 ORTHO05D018625 1.4e-48 201.1 2655 27.0
BolC2t09420H Brassica oleracea HOM05D005242 ORTHO05D018625 3.1e-48 199.9 152 63.8
A07p42410 Brassica napus HOM05D005242 ORTHO05D006778 9.0e-48 198.4 140 70.0
Duzib041G0461 Durio zibethinus HOM05D005242 ORTHO05D006778 2.0e-47 197.2 144 64.6
BraA07t31767Z Brassica rapa HOM05D005242 ORTHO05D006778 2.2e-46 193.7 141 69.5
THA.LOC104812037 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 8.4e-46 191.8 147 63.3
Thecc.08G153500 Theobroma cacao HOM05D005242 ORTHO05D006778 2.5e-45 190.3 142 63.4
C06p50980 Brassica napus HOM05D005242 ORTHO05D006778 1.2e-44 188.0 135 68.9
BolC6t40122H Brassica oleracea HOM05D005242 ORTHO05D006778 2.7e-44 186.8 138 67.4
Aa31LG4G6840 Aethionema arabicum HOM05D005242 ORTHO05D006778 6.1e-44 185.7 133 67.7
Cfa018319 Carpinus fangiana HOM05D005242 ORTHO05D006778 3.1e-40 173.3 186 50.5
Haze_17757 Corylus avellana HOM05D005242 ORTHO05D006778 3.1e-40 173.3 206 50.0
Gorai.009G254600 Gossypium raimondii HOM05D005242 ORTHO05D006778 5.3e-40 172.6 199 48.2
Cpa.g.sc21.205 Carica papaya HOM05D005242 ORTHO05D006778 3.4e-39 169.9 197 51.8
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 7.7e-39 168.7 144 60.4
QL02p039039 Quercus lobata HOM05D005242 ORTHO05D006778 1.0e-38 168.3 214 47.7
Gohir.A05G243801 Gossypium hirsutum HOM05D005242 ORTHO05D006778 8.5e-38 165.2 238 42.4
TWI60G0101 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 1.2e-36 161.4 226 47.8
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea HOM05D005242 ORTHO05D006778 1.4e-35 157.9 146 54.1
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea HOM05D005242 ORTHO05D006778 1.4e-35 157.9 146 54.1
Manes.02G179900 Manihot esculenta HOM05D005242 ORTHO05D006778 2.3e-35 157.1 192 48.4
Lj5g0003985 Lotus japonicus HOM05D005242 ORTHO05D006778 8.8e-35 155.2 170 49.4
Carub.0002s2369 Capsella rubella HOM05D005242 ORTHO05D018625 1.5e-34 154.5 3547 25.9
Eucgr.F02701 Eucalyptus grandis HOM05D005242 ORTHO05D006778 1.5e-34 154.5 267 42.7
Ciclev10003945m.g Citrus clementina HOM05D005242 ORTHO05D006778 2.0e-34 154.1 332 41.0
Lalb_Chr21g0305491 Lupinus albus HOM05D005242 ORTHO05D006778 2.0e-34 154.1 147 54.4
Psat6g192600 Pisum sativum HOM05D005242 ORTHO05D006778 5.7e-34 152.5 145 55.2
MD05G1026800 Malus domestica HOM05D005242 ORTHO05D006778 9.7e-34 151.8 421 34.7
Oeu011949.1 Olea europaea HOM05D005242 ORTHO05D006778 9.7e-34 151.8 264 39.4
PGR042G2442 Punica granatum HOM05D005242 ORTHO05D006778 1.7e-33 151.0 268 40.3
PSO447G0326 Papaver somniferum HOM05D005242 ORTHO05D006778 2.2e-33 150.6 153 50.3
Medtr1246s0010 Medicago truncatula HOM05D005242 ORTHO05D006778 3.7e-33 149.8 144 50.0
Atru.chr13.2099 Acer truncatum HOM05D005242 ORTHO05D006778 8.2e-33 148.7 408 32.4
Actinidia29532 Actinidia chinensis HOM05D005242 ORTHO05D006778 8.2e-33 148.7 343 36.7
Sopen04g027460 Solanum pennellii HOM05D005242 ORTHO05D006778 1.8e-32 147.5 181 45.9
Rhsim11G0083400 Rhododendron simsii HOM05D005242 ORTHO05D006778 2.4e-32 147.1 310 37.7
Cc10_g14420 Coffea canephora HOM05D005242 ORTHO05D006778 1.2e-31 144.8 269 38.3
PGSC0003DMG400024099 Solanum tuberosum HOM05D005242 ORTHO05D006778 1.2e-31 144.8 207 43.5
CSS0002508 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 2.0e-31 144.1 265 39.2
Peaxi162Scf00599g00049 Petunia axillaris HOM05D005242 ORTHO05D006778 2.6e-31 143.7 288 37.5
CSS0020035 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 3.4e-31 143.3 265 39.2
Nitab4.5_0010749g0010 Nicotiana tabacum HOM05D005242 ORTHO05D006778 3.4e-31 143.3 249 39.0
Nn5g28757 Nelumbo nucifera HOM05D005242 ORTHO05D006778 1.0e-30 141.7 298 38.6
PSO210G0022 Papaver somniferum HOM05D005242 ORTHO05D006778 1.0e-30 141.7 201 44.8
Medtr1g098690 Medicago truncatula HOM05D005242 ORTHO05D006778 1.3e-30 141.4 195 44.1
Dinv25870 Davidia involucrata HOM05D005242 ORTHO05D006778 1.7e-30 141.0 250 42.4
MD10G1026100 Malus domestica HOM05D005242 ORTHO05D006778 1.7e-30 141.0 411 34.8
Glyma.10G224400 Glycine max HOM05D005242 ORTHO05D006778 2.2e-30 140.6 143 50.3
Sabra05G0147300 Salix brachista HOM05D005242 ORTHO05D006778 2.2e-30 140.6 486 33.3
Solyc04g071490.3 Solanum lycopersicum HOM05D005242 ORTHO05D006778 2.9e-30 140.2 194 43.8
CAN.G268.26 Capsicum annuum HOM05D005242 ORTHO05D006778 3.8e-30 139.8 286 36.7
Glyma.20G167400 Glycine max HOM05D005242 ORTHO05D006778 6.5e-30 139.0 143 51.7
VMungo0720G2917 Vigna mungo HOM05D005242 ORTHO05D006778 1.1e-29 138.3 151 48.3
BcaC03g15700 Brassica carinata HOM05D005242 ORTHO05D006778 2.5e-29 137.1 107 66.4
Potri.002G067700 Populus trichocarpa HOM05D005242 ORTHO05D006778 2.5e-29 137.1 464 31.5
CANSAT25G1562 Cannabis sativa HOM05D005242 ORTHO05D006778 3.2e-29 136.7 302 37.4
SalBow6G1825 Salvia bowleyana HOM05D005242 ORTHO05D006778 5.5e-29 136.0 274 39.4
FAN27G0674 Fragaria x ananassa HOM05D005242 ORTHO05D006778 9.4e-29 135.2 201 42.8
Peaxi162Scf01294g00121 Petunia axillaris HOM05D005242 ORTHO05D006778 2.1e-28 134.0 288 38.5
Phvul.007G080300 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 1.4e-27 131.3 146 45.2
DCAR_001139 Daucus carota HOM05D005242 ORTHO05D006778 1.8e-27 131.0 247 39.7
FAN24G0150 Fragaria x ananassa HOM05D005242 ORTHO05D006778 3.0e-27 130.2 297 36.7
FAN15G2695 Fragaria x ananassa HOM05D005242 ORTHO05D006778 6.7e-27 129.0 288 36.8
SGA_v2.0_scaffold19G08682 Striga asiatica HOM05D001302 ORTHO05D001107 6.7e-27 129.0 237 36.7
FAN20G3127 Fragaria x ananassa HOM05D005242 ORTHO05D006778 1.1e-26 128.3 291 36.1
vmacro01456 Vaccinium macrocarpon HOM05D005242 ORTHO05D006778 3.3e-26 126.7 335 34.3
Nitab4.5_0001062g0060 Nicotiana tabacum HOM05D005242 ORTHO05D006778 5.7e-26 125.9 304 34.5
Potri.005G192700 Populus trichocarpa HOM05D005242 ORTHO05D006778 5.7e-26 125.9 506 31.2
CSS0021128 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 9.7e-26 125.2 202 40.1
Aqoxy5G02077 Aquilegia oxysepala HOM05D005242 ORTHO05D006778 1.3e-25 124.8 394 30.5
Prupe.8G031300 Prunus persica HOM05D005242 ORTHO05D006778 2.8e-25 123.6 475 29.9
AUR62013591 Chenopodium quinoa HOM05D005242 ORTHO05D006778 3.7e-25 123.2 252 38.5
Sc26g0002570 Simmondsia chinensis HOM05D005242 ORTHO05D006778 3.7e-25 123.2 239 39.7
AUR62026703 Chenopodium quinoa HOM05D005242 ORTHO05D006778 4.8e-25 122.9 225 39.1
VMungo0464G2160 Vigna mungo HOM05D005242 ORTHO05D006778 1.4e-24 121.3 657 28.8
GSVIVG01034538001 Vitis vinifera HOM05D005242 ORTHO05D006778 1.8e-24 120.9 325 32.3
CDE02G4447 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 7.0e-24 119.0 208 39.4
CiPaw.16G012200 Carya illinoinensis HOM05D005242 ORTHO05D006778 9.1e-24 118.6 511 28.8
EL10Ac1g01555 Beta vulgaris HOM05D005242 ORTHO05D006778 1.2e-23 118.2 256 37.1
ATR0820G162 Amborella trichopoda HOM05D005242 ORTHO05D006778 2.0e-23 117.5 145 45.5
Glyma.16G166700 Glycine max HOM05D005242 ORTHO05D006778 1.7e-22 114.4 685 27.9
Glyma.02G081300 Glycine max HOM05D005242 ORTHO05D006778 2.9e-22 113.6 690 27.8
CAN.G18.12 Capsicum annuum HOM05D005242 ORTHO05D006778 6.5e-22 112.5 143 42.7
RcHm_v2.0_Chr6g0275301 Rosa chinensis HOM05D005242 ORTHO05D006778 1.9e-21 110.9 311 31.8
C02p32780 Brassica napus HOM05D005242 ORTHO05D018625 1.6e-20 107.8 3588 25.8
Actinidia17789 Actinidia chinensis HOM05D005242 ORTHO05D006778 2.1e-20 107.5 284 33.8
Migut.N03213 Erythranthe guttata HOM05D005242 ORTHO05D006778 2.1e-20 107.5 154 45.5
HanXRQChr05g0161961 Helianthus annuus HOM05D005242 ORTHO05D006778 2.1e-20 107.5 119 42.9
CDE08G0940 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 6.1e-20 105.9 178 38.8
Lsat_1_v5_gn_9_40940 Lactuca sativa HOM05D005242 ORTHO05D006778 1.0e-19 105.1 116 47.4
Sc02g0004040 Simmondsia chinensis HOM05D005242 ORTHO05D006778 3.9e-19 103.2 199 36.2
Sp5g31920 Schrenkiella parvula HOM05D005242 ORTHO05D006778 1.1e-18 101.7 67 68.7
PGSC0003DMG402010796 Solanum tuberosum HOM05D005242 ORTHO05D006778 2.0e-18 100.9 130 36.9
THA.LOC104813717 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 2.6e-18 100.5 3559 24.5
Lsat_1_v5_gn_6_100581 Lactuca sativa HOM05D005242 ORTHO05D006778 4.4e-18 99.8 200 35.5
DCAR_014441 Daucus carota HOM05D005242 ORTHO05D006778 7.4e-18 99.0 299 29.4
CiPaw.15G015900 Carya illinoinensis HOM05D005242 ORTHO05D006778 8.2e-17 95.5 468 28.4
Hund17437 Selenicereus undatus HOM05D005242 ORTHO05D006778 7.0e-16 92.4 233 34.8
Sopen12g029170 Solanum pennellii HOM05D005242 ORTHO05D006778 1.6e-15 91.3 204 29.9
Solyc12g056560.2 Solanum lycopersicum HOM05D005242 ORTHO05D006778 2.0e-15 90.9 204 30.4
unitig_52.g17530 Utricularia gibba HOM05D005242 ORTHO05D006778 2.0e-15 90.9 385 29.9
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 5.9e-15 89.4 96 47.9
SEGI_03948 Sequoiadendron giganteum HOM05D005242 ORTHO05D000080 6.1e-12 79.3 135 36.3
FvH4_2g13660 Fragaria vesca HOM05D005242 ORTHO05D006778 3.0e-11 77.0 248 33.9
Sed0006497 Sechium edule HOM05D005242 ORTHO05D006778 5.7e-10 72.8 137 38.7
Nitab4.5_0002487g0010 Nicotiana tabacum HOM05D001302 ORTHO05D001107 2.8e-09 70.5 229 32.8
Ca_27679_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 7.0e-08 65.9 545 25.7
ClCG09G010170 Citrullus lanatus HOM05D005242 ORTHO05D006778 5.9e-07 62.8 397 28.5
Nitab4.5_0004505g0020 Nicotiana tabacum HOM05D005242 ORTHO05D006778 1.7e-06 61.2 206 30.6
Zm00001eb139380 Zea mays HOM05D005242 ORTHO05D006778 3.8e-06 60.1 98 33.7


User provided reference genes

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