Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 4.4e-141 504.6 254 100.0
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 4.8e-111 404.8 255 77.6
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 9.0e-110 400.6 254 78.0
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.2e-109 400.2 254 78.7
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 2.0e-109 399.4 254 78.3
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 2.1e-106 389.4 265 75.1
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 2.2e-100 369.4 257 72.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 5.0e-100 368.2 255 74.9
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 4.2e-99 365.2 257 71.6
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 7.2e-99 364.4 256 72.7
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 3.6e-98 362.1 257 71.6
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 2.8e-95 352.4 248 71.4
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 4.8e-95 351.7 254 71.3
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.6e-82 308.9 256 64.1
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.1e-78 297.4 217 65.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 9.1e-78 294.3 195 72.3
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.8e-76 288.9 236 61.9
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.6e-74 283.5 216 61.6
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 8.0e-74 281.2 253 57.7
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 5.2e-73 278.5 228 59.6
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 6.8e-73 278.1 215 60.5
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 8.8e-73 277.7 195 68.2
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.0e-72 276.6 193 67.9
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 4.4e-72 275.4 269 56.1
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 7.5e-72 274.6 210 64.3
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 9.8e-72 274.2 190 69.5
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 9.8e-72 274.2 229 61.6
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.7e-71 273.5 255 55.7
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.2e-71 273.1 259 56.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.8e-71 272.7 185 69.2
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 3.7e-71 272.3 191 65.4
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 1.8e-70 270.0 219 62.1
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.8e-70 270.0 194 66.5
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.8e-70 270.0 195 68.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 7.0e-70 268.1 233 58.4
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.6e-69 266.9 216 63.0
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 1.6e-69 266.9 194 64.4
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.6e-69 266.9 192 67.2
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 2.0e-69 266.5 212 60.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 3.5e-69 265.8 196 65.8
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 7.7e-69 264.6 206 63.6
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.7e-68 263.5 193 64.2
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 2.2e-68 263.1 192 67.7
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 5.0e-68 261.9 194 64.9
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.0e-68 261.9 193 66.8
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 1.5e-67 260.4 192 65.1
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 2.5e-67 259.6 193 66.3
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.5e-67 259.6 247 53.0
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 4.2e-67 258.8 193 65.3
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.2e-66 257.3 244 54.9
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.1e-66 256.5 254 53.5
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.7e-66 256.1 195 62.6
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 3.6e-66 255.8 245 54.3
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.6e-66 255.8 215 61.4
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 3.6e-66 255.8 249 53.8
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.7e-66 255.4 253 53.8
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 4.7e-66 255.4 221 56.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 6.1e-66 255.0 252 51.2
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 6.1e-66 255.0 166 69.9
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 6.1e-66 255.0 218 56.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 8.0e-66 254.6 225 58.2
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 8.0e-66 254.6 196 64.8
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.4e-65 253.8 255 54.1
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.8e-65 253.4 216 57.9
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 2.3e-65 253.1 243 50.6
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 3.0e-65 252.7 238 54.6
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 4.0e-65 252.3 192 63.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 4.0e-65 252.3 196 60.7
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 6.8e-65 251.5 160 71.2
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.8e-65 251.5 192 63.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.2e-64 250.8 226 55.3
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.5e-64 250.4 206 59.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 5.7e-64 248.4 192 61.5
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 5.7e-64 248.4 202 62.9
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 7.5e-64 248.1 202 62.9
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.2e-63 246.5 165 68.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.8e-63 246.1 202 62.4
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.7e-63 245.7 192 63.5
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 3.7e-63 245.7 168 66.7
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 8.3e-63 244.6 181 64.1
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.1e-62 244.2 260 51.2
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.1e-62 244.2 226 57.1
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 5.4e-62 241.9 166 66.9
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 7.0e-62 241.5 206 61.7
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 7.0e-62 241.5 171 63.7
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 5.9e-61 238.4 196 60.2
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 7.7e-61 238.0 214 53.7
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.3e-60 237.3 263 49.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 8.6e-60 234.6 183 60.7
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.5e-59 233.8 255 52.5
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.4e-57 227.3 190 55.8
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 3.0e-57 226.1 143 73.4
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 5.2e-57 225.3 177 58.8
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 1.2e-56 224.2 210 54.3
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.0e-56 223.4 264 49.2
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 5.4e-54 215.3 318 39.0
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.3e-49 199.9 125 71.2
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.2e-47 193.4 195 51.3
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 8.6e-44 181.4 194 43.3
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 8.6e-44 181.4 251 41.0
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 7.5e-40 168.3 133 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 4.9e-39 165.6 204 42.6
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 4.4e-32 142.5 201 46.8
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.7e-31 140.6 168 39.3
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 6.4e-31 138.7 155 37.4
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 5.2e-25 119.0 66 80.3
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.3e-23 114.4 90 64.4
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.4e-23 112.1 124 49.2
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.1e-22 111.3 217 33.2
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 8.7e-20 101.7 164 36.6
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.5e-19 100.9 205 29.3
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-17 94.4 78 57.7
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 6.2e-10 68.9 105 40.0
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 6.4e-07 58.9 38 71.1
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 8.4e-07 58.5 50 54.0
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 1.1e-06 58.2 32 81.2


User provided reference genes

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