Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.0e-82 310.1 158 100.0
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 4.1e-68 261.5 153 85.6
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 3.4e-67 258.5 153 82.4
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 5.0e-66 254.6 151 84.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 8.5e-66 253.8 153 82.4
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 1.4e-65 253.1 153 81.0
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 1.9e-65 252.7 153 82.4
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.6e-64 249.6 149 81.9
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.6e-64 249.6 154 81.8
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.6e-64 249.6 154 81.8
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 6.1e-64 247.7 154 81.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 7.9e-64 247.3 153 80.4
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.4e-63 246.5 154 81.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 4.8e-61 238.0 154 77.3
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 8.0e-56 220.7 157 70.7
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.8e-55 219.5 153 71.2
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 2.3e-55 219.2 153 70.6
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 3.0e-55 218.8 153 73.2
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 5.2e-55 218.0 153 70.6
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 6.7e-55 217.6 156 69.2
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 7.5e-54 214.2 152 71.7
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.2e-53 212.6 153 67.3
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.8e-52 209.5 153 69.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 2.0e-51 206.1 153 68.6
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 2.7e-51 205.7 133 75.2
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 3.5e-51 205.3 156 67.3
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 4.5e-51 204.9 156 69.2
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 1.3e-50 203.4 157 66.9
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 3.8e-50 201.8 156 67.3
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 5.0e-50 201.4 153 65.4
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 6.5e-50 201.1 156 67.3
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.1e-49 200.3 138 70.3
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.1e-49 200.3 139 71.2
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.5e-49 199.9 156 66.7
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.5e-49 199.1 138 71.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.5e-49 199.1 129 77.5
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 3.2e-49 198.7 156 64.7
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 3.2e-49 198.7 125 76.8
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.2e-49 198.4 126 75.4
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 5.5e-49 198.0 148 66.9
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 7.2e-49 197.6 124 78.2
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 7.2e-49 197.6 156 62.8
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 9.4e-49 197.2 125 76.0
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 1.6e-48 196.4 153 66.7
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.1e-48 196.1 156 66.0
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 2.1e-48 196.1 129 73.6
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 4.7e-48 194.9 153 67.3
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 6.1e-48 194.5 150 64.7
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.1e-48 194.5 156 66.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 8.0e-48 194.1 141 70.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 8.0e-48 194.1 156 60.9
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 8.0e-48 194.1 125 76.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.0e-47 193.7 131 71.8
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.0e-47 193.7 147 66.7
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.0e-47 193.7 126 75.4
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.0e-47 193.7 129 72.1
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.4e-47 193.4 129 72.1
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.4e-47 193.4 132 68.9
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.8e-47 193.0 155 64.5
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.8e-47 193.0 153 64.7
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 4.0e-47 191.8 156 64.7
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 5.2e-47 191.4 153 62.1
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 5.2e-47 191.4 129 75.2
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 6.8e-47 191.0 141 69.5
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.2e-46 190.3 156 64.7
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.5e-46 189.9 156 63.5
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.5e-46 189.9 138 65.2
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.5e-46 189.9 128 72.7
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 2.0e-46 189.5 146 65.8
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.6e-46 189.1 155 66.5
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 9.8e-46 187.2 133 66.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 9.8e-46 187.2 155 63.9
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 9.8e-46 187.2 129 70.5
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.2e-45 186.0 156 62.8
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 2.8e-45 185.7 151 62.3
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 3.7e-45 185.3 156 62.2
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 8.3e-45 184.1 147 61.2
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.1e-44 183.7 129 66.7
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.4e-44 183.3 150 61.3
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.8e-44 183.0 156 62.8
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 2.4e-44 182.6 124 71.0
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 5.4e-44 181.4 156 59.6
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 2.0e-43 179.5 147 61.2
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.7e-43 179.1 133 64.7
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 4.5e-43 178.3 129 68.2
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.3e-42 176.8 154 58.4
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.2e-42 176.0 153 59.5
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 5.0e-42 174.9 145 61.4
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 8.5e-42 174.1 153 60.8
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-41 173.7 153 60.8
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.5e-41 173.3 155 58.1
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.9e-41 172.9 145 60.0
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 2.5e-41 172.6 103 80.6
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 2.5e-41 172.6 140 62.1
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 4.2e-41 171.8 129 66.7
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 7.2e-41 171.0 151 58.9
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.2e-40 170.2 128 67.2
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 2.1e-40 169.5 148 61.5
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 6.1e-40 167.9 148 58.1
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 6.1e-40 167.9 126 65.1
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.0e-39 167.2 129 62.0
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.3e-39 166.0 126 66.7
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 6.8e-39 164.5 126 61.9
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 2.6e-38 162.5 156 54.5
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 9.8e-38 160.6 124 62.9
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.3e-37 160.2 148 58.8
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.7e-37 158.7 138 56.5
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 7.0e-36 154.5 130 61.5
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 3.3e-33 145.6 153 52.3
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 7.5e-30 134.4 155 50.3
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.4e-28 130.2 119 54.6
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 9.2e-28 127.5 123 49.6
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 5.0e-26 121.7 136 49.3
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 2.5e-25 119.4 126 49.2
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.2e-24 117.1 124 51.6
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 3.1e-23 112.5 118 47.5
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 3.1e-23 112.5 117 49.6
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 7.0e-20 101.3 92 58.7
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 4.6e-19 98.6 93 51.6
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 1.1e-17 94.0 62 79.0
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.1e-17 94.0 81 50.6
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 2.5e-17 92.8 114 43.9
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 2.0e-14 83.2 85 56.5
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 7.5e-14 81.3 100 50.0
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.9e-12 76.6 120 40.0


User provided reference genes

Program Settings