Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 8.0e-81 303.9 176 100.0
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.7e-54 216.5 224 54.9
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 3.7e-54 215.3 225 55.1
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 1.8e-53 213.0 225 55.1
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-53 212.6 226 55.8
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 2.4e-53 212.6 226 55.8
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 7.0e-53 211.1 183 62.8
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 7.0e-53 211.1 183 62.8
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 7.0e-53 211.1 183 62.8
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.6e-52 209.9 225 56.0
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.7e-52 209.1 178 63.5
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 5.9e-52 208.0 226 56.6
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.0e-51 205.7 176 63.1
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 3.9e-51 205.3 219 53.0
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 3.9e-51 205.3 219 53.0
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 9.5e-50 200.7 222 52.3
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 8.0e-49 197.6 174 59.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.1e-48 195.7 232 54.7
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.9e-45 186.4 178 55.1
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 2.4e-45 186.0 179 55.9
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 3.2e-45 185.7 177 54.8
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.1e-45 185.3 180 56.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.2e-44 183.7 179 54.7
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 2.7e-44 182.6 180 53.9
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.7e-44 182.6 179 53.1
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.6e-44 181.8 180 55.0
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 4.6e-44 181.8 180 51.7
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 6.0e-44 181.4 180 51.1
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 7.8e-44 181.0 179 53.1
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.3e-43 180.3 178 52.8
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.3e-43 180.3 180 51.7
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.7e-43 179.9 175 54.9
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.3e-43 179.5 176 54.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.0e-43 179.1 177 53.1
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 3.0e-43 179.1 180 52.2
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 3.9e-43 178.7 176 52.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 3.9e-43 178.7 180 52.2
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 3.9e-43 178.7 178 52.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 3.9e-43 178.7 189 50.3
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 6.6e-43 177.9 181 51.4
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 8.6e-43 177.6 180 51.7
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 8.6e-43 177.6 178 52.8
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 8.6e-43 177.6 179 50.8
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 8.6e-43 177.6 181 51.4
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.1e-42 177.2 192 50.0
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.1e-42 177.2 175 54.3
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.5e-42 176.8 179 52.5
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 1.5e-42 176.8 178 52.8
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.6e-42 174.9 131 66.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 7.3e-42 174.5 178 51.7
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 7.3e-42 174.5 179 50.3
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 9.5e-42 174.1 178 52.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 9.5e-42 174.1 178 51.7
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.2e-41 173.7 175 51.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 2.1e-41 172.9 180 50.0
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 2.1e-41 172.9 184 49.5
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.8e-41 172.6 178 51.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.8e-41 172.6 212 46.7
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 3.6e-41 172.2 177 48.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.7e-41 171.8 176 51.1
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.1e-41 171.0 179 51.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 8.1e-41 171.0 173 50.9
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.4e-40 170.2 176 50.6
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.8e-40 169.9 181 50.3
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.8e-40 169.9 179 51.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 4.0e-40 168.7 202 47.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 6.8e-40 167.9 174 49.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.2e-39 167.2 179 50.8
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.2e-39 167.2 181 49.2
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.0e-39 166.4 175 49.1
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.6e-39 166.0 174 50.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 3.4e-39 165.6 178 47.2
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 3.4e-39 165.6 171 49.1
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.7e-38 163.3 172 49.4
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.7e-38 163.3 182 47.3
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 7.1e-37 157.9 178 46.1
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.2e-36 157.1 172 48.3
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.1e-36 156.4 175 49.1
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 4.6e-36 155.2 177 45.2
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 7.8e-36 154.5 95 74.7
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 7.8e-36 154.5 194 42.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 2.3e-35 152.9 163 49.1
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 3.9e-35 152.1 176 45.5
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.5e-34 149.4 136 55.9
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 2.5e-34 149.4 179 46.4
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 5.6e-34 148.3 177 45.2
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 7.3e-34 147.9 176 43.2
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.6e-33 146.7 179 45.8
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.4e-32 143.7 94 67.0
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 4.0e-32 142.1 93 67.7
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 4.0e-32 142.1 89 75.3
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.5e-31 140.2 136 52.2
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 3.4e-31 139.0 97 67.0
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 7.6e-31 137.9 96 65.6
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 9.9e-31 137.5 180 43.3
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.9e-30 135.2 179 44.7
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 8.4e-30 134.4 102 63.7
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 3.2e-29 132.5 95 66.3
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 4.1e-29 132.1 95 64.2
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 7.8e-28 127.9 96 69.8
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.3e-27 127.1 116 57.8
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.7e-27 126.7 161 43.5
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.1e-26 124.0 151 43.0
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.8e-25 119.4 171 39.8
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 6.9e-24 114.8 182 40.7
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 9.0e-24 114.4 134 44.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.7e-22 110.2 79 60.8
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 6.4e-22 108.2 163 36.2
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.2e-21 105.9 59 79.7
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 3.2e-21 105.9 163 35.0
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 4.2e-21 105.5 121 49.6
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 5.4e-21 105.1 178 38.2
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 4.6e-20 102.1 145 39.3
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.9e-18 96.7 178 33.7
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 2.4e-16 89.7 82 54.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.2e-15 87.4 124 42.7
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 8.7e-11 71.2 97 43.3
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.1e-08 64.3 38 73.7
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 9.9e-07 57.8 35 71.4
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.9e-06 56.2 126 33.3
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 6.4e-06 55.1 33 72.7


User provided reference genes

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