Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G6060 Aethionema arabicum HOM05D008819 ORTHO05D003197 2.9e-152 542.0 298 100.0
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 5.1e-72 275.4 305 56.1
Carub.0002s2277 Capsella rubella HOM05D008819 ORTHO05D003197 1.8e-69 266.9 319 56.4
AT1G75860 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 2.6e-68 263.1 308 58.4
Sp5g31000 Schrenkiella parvula HOM05D008819 ORTHO05D003197 2.3e-64 250.0 325 56.6
Thhalv10019693m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 1.8e-61 240.4 285 58.9
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 2.5e-58 229.9 307 47.6
AT1G20100 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 1.5e-55 220.7 304 50.3
BcaC05g25908 Brassica carinata HOM05D008819 ORTHO05D003197 1.4e-53 214.2 302 49.7
C05p18590 Brassica napus HOM05D008819 ORTHO05D003197 1.4e-53 214.2 302 49.7
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 1.8e-53 213.8 294 51.7
BraA06t24727Z Brassica rapa HOM05D008819 ORTHO05D003197 2.7e-52 209.9 301 49.8
BolC6t40021H Brassica oleracea HOM05D008819 ORTHO05D003197 3.5e-52 209.5 318 47.2
BcaNung03339 Brassica carinata HOM05D008819 ORTHO05D003197 5.9e-52 208.8 303 47.5
BolC5t30570H Brassica oleracea HOM05D008819 ORTHO05D003197 5.9e-52 208.8 306 50.7
A06p16240 Brassica napus HOM05D008819 ORTHO05D003197 7.7e-52 208.4 301 47.5
C07p23350 Brassica napus HOM05D008819 ORTHO05D003197 1.0e-51 208.0 303 47.5
BcaC08g47318 Brassica carinata HOM05D008819 ORTHO05D003197 6.5e-51 205.3 318 46.2
BcaB07g32025 Brassica carinata HOM05D008819 ORTHO05D003197 4.2e-50 202.6 309 49.8
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 4.2e-50 202.6 313 49.2
BolC7t42868H Brassica oleracea HOM05D008819 ORTHO05D003197 4.2e-50 202.6 304 48.7
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 4.2e-50 202.6 283 48.8
C06p49830 Brassica napus HOM05D008819 ORTHO05D003197 2.1e-49 200.3 318 45.9
Thhalv10008464m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 4.7e-49 199.1 298 50.3
Carub.0001s1963 Capsella rubella HOM05D008819 ORTHO05D003197 8.0e-49 198.4 304 47.0
THA.LOC104809551 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 3.4e-47 193.0 311 46.3
BcaB03g14340 Brassica carinata HOM05D008819 ORTHO05D003197 1.4e-37 161.0 305 39.7
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 3.1e-37 159.8 307 45.0
BcaB03g14414 Brassica carinata HOM05D008819 ORTHO05D003197 9.2e-37 158.3 305 39.3
Sp1g17870 Schrenkiella parvula HOM05D008819 ORTHO05D003197 9.5e-34 148.3 305 37.0
BolC3t16044H Brassica oleracea HOM05D008819 ORTHO05D003197 2.3e-32 143.7 221 43.9
THA.LOC104813240 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 2.4e-29 133.7 283 39.6
BcaC01g06727 Brassica carinata HOM05D008819 ORTHO05D003197 1.6e-25 120.9 224 38.4
CARHR020580 Cardamine hirsuta HOM05D008819 ORTHO05D003197 1.6e-25 120.9 180 43.3
C03p37510 Brassica napus HOM05D008819 ORTHO05D003197 7.0e-21 105.5 224 37.5
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 1.6e-17 94.4 337 33.8
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 6.2e-17 92.4 314 33.8
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 1.1e-16 91.7 317 33.1
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.0e-16 89.7 229 33.6
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 6.8e-16 89.0 323 35.3
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 2.0e-15 87.4 313 36.1
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 4.9e-14 82.8 269 33.1
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 1.1e-13 81.6 248 29.8
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.4e-13 81.3 236 29.7
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.9e-13 80.9 340 31.8
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.4e-13 80.5 307 35.2
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.2e-13 80.1 254 30.7
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.4e-13 79.3 283 32.9
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 7.1e-13 79.0 235 31.1
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 9.2e-13 78.6 270 28.9
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 9.2e-13 78.6 251 29.9
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 3.5e-12 76.6 253 28.9
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.5e-12 76.6 305 33.4
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.8e-12 75.5 313 28.8
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.0e-11 75.1 241 31.1
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.3e-11 74.7 283 31.4
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.3e-11 74.7 248 30.2
BcaC03g14371 Brassica carinata HOM05D008819 ORTHO05D003197 1.7e-11 74.3 227 33.0
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.0e-11 73.6 243 30.0
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.9e-11 73.2 340 31.8
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 5.1e-11 72.8 245 31.8
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 6.6e-11 72.4 322 32.0
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 8.6e-11 72.0 347 25.4
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 8.6e-11 72.0 232 30.2
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 2.5e-10 70.5 253 32.0
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.3e-10 70.1 226 31.9
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 3.3e-10 70.1 255 27.5
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 4.3e-10 69.7 321 31.8
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 7.3e-10 68.9 242 31.4
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 7.3e-10 68.9 247 29.1
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 7.3e-10 68.9 259 29.3
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 7.3e-10 68.9 252 30.6
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 7.3e-10 68.9 251 30.3
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 7.3e-10 68.9 320 31.9
A08p16950 Brassica napus HOM05D008819 ORTHO05D003197 9.5e-10 68.6 68 57.4
C02p17840 Brassica napus HOM05D008819 ORTHO05D003197 1.2e-09 68.2 137 40.1
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.2e-09 68.2 242 31.0
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 1.6e-09 67.8 278 28.1
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.6e-09 67.8 249 27.3
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 2.1e-09 67.4 327 29.7
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.1e-09 67.4 338 25.7
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.8e-09 67.0 314 31.5
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 8.1e-09 65.5 329 32.8
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 1.1e-08 65.1 238 26.1
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 1.1e-08 65.1 314 33.1
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.4e-08 64.7 266 28.2
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.8e-08 64.3 347 30.5
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 1.8e-08 64.3 262 27.1
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 4.0e-08 63.2 332 28.9
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 4.0e-08 63.2 248 26.6
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 8.9e-08 62.0 305 29.8
AL2G36300 Arabidopsis lyrata HOM05D014797 ORTHO05D016596 1.2e-07 61.6 101 40.6
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 1.5e-07 61.2 347 30.8
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.0e-07 60.8 276 25.4
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 2.6e-07 60.5 312 31.4
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 3.4e-07 60.1 277 26.4
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 4.4e-07 59.7 253 27.7
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 4.4e-07 59.7 318 30.2
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 5.8e-07 59.3 294 25.9
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 9.9e-07 58.5 230 27.4
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 1.7e-06 57.8 340 27.9
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.7e-06 57.8 281 26.0
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 2.9e-06 57.0 146 27.4
CARHR069790 Cardamine hirsuta HOM05D014797 ORTHO05D016596 6.4e-06 55.8 124 34.7
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 6.4e-06 55.8 247 27.1
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 8.4e-06 55.5 239 25.1


User provided reference genes

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