Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.7e-44 182.2 87 100.0
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-27 126.3 90 73.3
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 4.3e-27 124.4 91 72.5
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 4.3e-27 124.4 91 72.5
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 3.6e-26 121.3 91 70.3
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 3.6e-26 121.3 91 70.3
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 8.9e-25 116.7 84 70.2
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.7e-23 112.5 77 74.0
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 2.4e-22 108.6 91 65.9
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 5.4e-22 107.5 91 65.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 5.4e-22 107.5 91 65.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 9.2e-22 106.7 95 65.3
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 2.7e-21 105.1 94 64.9
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 2.7e-21 105.1 88 65.9
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.5e-21 104.8 94 67.0
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 2.4e-17 92.0 102 52.9
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.0e-16 89.0 74 58.1
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 2.0e-16 89.0 74 58.1
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 3.4e-16 88.2 79 57.0
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 3.4e-16 88.2 79 57.0
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 4.4e-16 87.8 71 62.0
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 4.4e-16 87.8 77 59.7
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 4.4e-16 87.8 74 63.5
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 4.4e-16 87.8 66 62.1
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 5.8e-16 87.4 69 65.2
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 5.8e-16 87.4 78 55.1
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 7.6e-16 87.0 71 63.4
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 7.6e-16 87.0 70 60.0
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.3e-15 86.3 73 60.3
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.3e-15 86.3 99 47.5
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.3e-15 86.3 76 61.8
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.7e-15 85.9 71 62.0
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 1.7e-15 85.9 68 64.7
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 2.2e-15 85.5 66 60.6
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.9e-15 85.1 69 65.2
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 3.8e-15 84.7 78 59.0
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 3.8e-15 84.7 83 56.6
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.9e-15 84.3 100 51.0
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 4.9e-15 84.3 100 51.0
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 4.9e-15 84.3 100 51.0
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.9e-15 84.3 100 51.0
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 4.9e-15 84.3 66 62.1
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 6.4e-15 84.0 66 62.1
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 8.4e-15 83.6 99 50.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 8.4e-15 83.6 68 63.2
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.1e-14 83.2 100 51.0
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.1e-14 83.2 71 59.2
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.9e-14 82.4 72 59.7
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 2.4e-14 82.0 73 63.0
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 2.4e-14 82.0 66 60.6
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 3.2e-14 81.6 71 59.2
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 4.2e-14 81.3 94 53.2
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 4.2e-14 81.3 95 54.7
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 4.2e-14 81.3 72 56.9
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 4.2e-14 81.3 85 51.8
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.4e-14 80.9 73 58.9
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.4e-14 80.9 73 58.9
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 5.4e-14 80.9 89 53.9
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.1e-14 80.5 72 59.7
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.2e-13 79.7 72 58.3
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.6e-13 79.3 77 53.2
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.6e-13 79.3 75 54.7
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.1e-13 79.0 73 58.9
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 2.1e-13 79.0 84 51.2
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.7e-13 78.6 72 58.3
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.7e-13 78.6 72 58.3
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.7e-13 78.6 73 54.8
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 4.6e-13 77.8 69 59.4
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 6.0e-13 77.4 74 58.1
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-12 76.6 72 56.9
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.3e-12 76.3 82 53.7
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.7e-12 75.9 78 51.3
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 2.3e-12 75.5 82 52.4
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 3.0e-12 75.1 78 53.8
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 5.1e-12 74.3 103 46.6
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 5.1e-12 74.3 74 58.1
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.9e-11 72.4 70 52.9
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 2.5e-11 72.0 69 56.5
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 4.3e-11 71.2 77 50.6
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 7.3e-11 70.5 70 52.9
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 9.6e-11 70.1 71 53.5
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.3e-10 69.7 67 53.7
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.3e-10 69.7 70 52.9
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 2.1e-10 68.9 75 48.0
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 2.1e-10 68.9 75 52.0
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 2.1e-10 68.9 79 48.1
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 2.1e-10 68.9 81 54.3
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.4e-09 66.2 75 52.0
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 1.4e-09 66.2 78 53.8
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 1.4e-09 66.2 79 50.6
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 1.8e-09 65.9 91 44.0
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 4.0e-09 64.7 70 47.1
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 4.0e-09 64.7 75 50.7
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 4.0e-09 64.7 69 53.6
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 9.0e-09 63.5 75 53.3
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.2e-08 63.2 65 49.2
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.5e-08 62.8 48 64.6
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 2.0e-08 62.4 72 48.6
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.6e-08 62.0 71 52.1
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.3e-07 59.7 75 50.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.7e-07 59.3 78 46.2
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 3.8e-07 58.2 84 42.9


User provided reference genes

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