Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 0.0e+00 1395.2 852 100.0
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.5e-204 716.5 865 57.3
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.6e-203 712.6 872 57.1
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 3.4e-201 706.1 866 58.2
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 1.3e-200 704.1 871 58.9
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.7e-197 693.7 867 57.0
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 2.3e-194 683.3 835 59.4
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.9e-188 663.7 864 59.6
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.7e-184 650.6 877 59.0
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.5e-180 637.5 865 57.2
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 5.2e-178 629.0 873 55.3
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.2e-176 623.6 894 56.6
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.2e-176 623.6 894 56.6
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 6.2e-147 525.8 882 51.2
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 7.5e-76 289.7 627 39.7
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 9.8e-76 289.3 632 40.5
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.1e-74 285.8 638 38.4
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.4e-74 285.4 872 33.8
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 4.1e-74 283.9 879 34.0
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 9.2e-74 282.7 663 40.9
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.6e-73 282.0 655 40.0
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 3.5e-73 280.8 909 32.7
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.0e-72 277.7 887 34.5
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 2.5e-71 274.6 663 36.5
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 3.3e-71 274.2 638 37.1
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 4.3e-71 273.9 939 32.9
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.8e-70 271.2 887 34.4
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 6.2e-70 270.0 622 38.9
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 6.2e-70 270.0 601 40.3
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 8.9e-69 266.2 663 38.0
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 9.9e-68 262.7 633 35.4
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.9e-67 261.2 620 37.4
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 2.9e-67 261.2 610 39.8
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 3.7e-67 260.8 935 31.6
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.9e-66 258.5 643 38.4
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 9.2e-66 256.1 932 31.0
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 2.1e-65 255.0 527 41.6
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 3.5e-65 254.2 624 37.3
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.0e-64 252.7 639 38.2
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.3e-64 252.3 662 36.4
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.3e-64 252.3 701 33.7
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 4.7e-62 243.8 616 37.0
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 8.1e-62 243.0 664 35.7
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.8e-61 241.9 637 36.3
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.8e-61 241.9 508 39.2
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 2.4e-61 241.5 656 35.2
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 4.0e-61 240.7 628 36.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 4.4e-60 237.3 612 37.6
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 9.9e-60 236.1 626 36.9
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 4.9e-59 233.8 498 40.0
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.1e-58 232.6 516 38.6
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.4e-58 231.5 650 32.9
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 3.2e-58 231.1 624 36.7
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 1.2e-57 229.2 668 35.6
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.1e-57 228.4 669 33.3
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 3.5e-57 227.6 616 36.9
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.5e-57 227.6 615 36.1
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 2.3e-56 224.9 691 33.1
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 3.0e-56 224.6 639 35.8
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.9e-56 224.2 707 33.2
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 3.9e-56 224.2 586 38.2
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 8.7e-56 223.0 617 35.2
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.1e-55 222.6 663 35.9
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.2e-54 219.2 620 35.0
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 2.1e-54 218.4 635 35.6
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 3.6e-54 217.6 603 38.1
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 3.6e-54 217.6 695 32.9
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 6.9e-53 213.4 715 33.6
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 4.4e-52 210.7 625 35.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 3.8e-51 207.6 318 47.8
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 3.8e-51 207.6 665 33.5
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.1e-50 206.1 498 36.9
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 9.3e-50 203.0 684 34.8
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 1.2e-49 202.6 666 34.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 6.0e-49 200.3 704 32.8
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.3e-48 199.1 601 34.8
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.3e-48 199.1 676 33.1
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 3.9e-48 197.6 606 34.5
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 3.6e-46 191.0 608 34.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 5.3e-45 187.2 646 32.8
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 9.0e-45 186.4 665 33.1
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 3.4e-44 184.5 610 34.3
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 9.9e-44 183.0 579 34.9
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.3e-43 182.6 511 34.8
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.6e-41 175.6 608 33.4
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 5.6e-39 167.2 530 32.5
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 4.8e-38 164.1 283 43.1
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 6.2e-38 163.7 503 36.0
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.8e-37 162.2 626 32.9
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 3.1e-37 161.4 543 33.5
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.8e-36 157.1 589 33.1
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 5.8e-36 157.1 589 33.1
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 7.6e-36 156.8 636 30.8
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 4.9e-35 154.1 662 31.9
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.5e-33 147.9 616 30.7
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 7.9e-33 146.7 605 31.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.8e-32 145.6 614 30.8
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 2.6e-28 131.7 666 28.7
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.6e-28 131.7 488 32.2
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 3.8e-27 127.9 458 33.0
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 7.1e-26 123.6 192 48.4
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.1e-23 116.3 346 32.1
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 8.2e-22 110.2 525 29.0
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 6.9e-21 107.1 593 31.5
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 2.5e-18 98.6 358 30.2
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.0e-16 93.2 344 33.4
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 2.3e-16 92.0 555 29.7
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 1.3e-11 76.3 235 33.6
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.7e-11 75.9 215 32.1
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.2e-09 69.7 507 26.8
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 1.1e-07 63.2 112 42.0
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.4e-07 61.2 530 25.1
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 4.4e-07 61.2 530 25.1
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.7e-07 60.8 167 37.7
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 6.3e-06 57.4 145 35.9


User provided reference genes

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