Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 3.6e-57 224.6 104 100.0
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.9e-45 185.7 103 80.6
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.7e-44 181.8 98 80.6
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 3.0e-43 178.3 102 79.4
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.1e-42 176.4 102 78.4
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 1.9e-42 175.6 102 78.4
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 9.6e-42 173.3 102 75.5
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.1e-41 172.2 102 77.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.8e-41 171.8 102 76.5
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.8e-41 171.8 102 76.5
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.8e-41 171.8 102 76.5
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 3.6e-41 171.4 102 76.5
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 6.9e-40 167.2 102 74.5
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 5.8e-39 164.1 100 73.0
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.7e-38 162.5 103 73.8
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 4.2e-37 157.9 102 71.6
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 4.2e-37 157.9 102 71.6
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 7.1e-37 157.1 100 69.0
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-36 155.6 107 69.2
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-36 155.6 107 69.2
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.3e-35 152.1 95 70.5
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.0e-35 151.8 100 63.0
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 8.7e-35 150.2 100 66.0
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 8.7e-35 150.2 100 63.0
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.7e-35 150.2 100 63.0
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.7e-35 150.2 100 63.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.7e-35 150.2 100 63.0
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.1e-34 149.8 102 68.6
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.9e-34 149.1 100 65.0
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 4.3e-34 147.9 100 63.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.6e-33 146.0 100 64.0
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.1e-33 145.6 99 63.6
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 2.1e-33 145.6 100 63.0
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 3.7e-33 144.8 100 61.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.7e-33 144.8 100 63.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.2e-33 144.1 97 61.9
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.2e-33 144.1 97 61.9
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 6.2e-33 144.1 97 61.9
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.2e-33 144.1 100 61.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 8.1e-33 143.7 99 61.6
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.4e-32 142.9 100 62.0
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.8e-32 142.5 98 62.2
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 2.4e-32 142.1 100 62.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 4.0e-32 141.4 99 63.6
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 4.0e-32 141.4 99 63.6
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 5.3e-32 141.0 100 62.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.2e-31 139.8 100 59.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 2.0e-31 139.0 100 61.0
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.6e-31 138.7 98 62.2
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.0e-30 136.7 102 55.9
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.7e-30 136.0 100 58.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 2.2e-30 135.6 99 54.5
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 2.9e-30 135.2 100 59.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 3.8e-30 134.8 92 63.0
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 6.5e-30 134.0 82 64.6
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 6.5e-30 134.0 100 58.0
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 8.4e-30 133.7 92 64.1
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.1e-29 133.3 103 57.3
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 4.2e-29 131.3 103 57.3
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.2e-29 131.3 103 55.3
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 5.5e-29 131.0 92 62.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.3e-29 130.2 97 57.7
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.7e-28 128.6 95 58.9
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 4.6e-28 127.9 92 60.9
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.0e-28 127.5 103 54.4
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 1.3e-27 126.3 92 58.7
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.8e-27 125.9 99 56.6
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.3e-27 125.6 98 58.2
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.0e-27 125.2 79 64.6
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.0e-27 125.2 99 55.6
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 3.9e-27 124.8 97 54.6
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 4.3e-26 121.3 93 59.1
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.3e-26 121.3 98 51.0
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 5.7e-26 120.9 61 78.7
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 7.4e-26 120.6 99 48.5
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 3.7e-25 118.2 95 55.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.8e-25 117.9 100 53.0
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 4.8e-25 117.9 87 63.2
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 4.8e-25 117.9 97 53.6
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 6.2e-25 117.5 98 52.0
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 8.2e-25 117.1 98 52.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 4.1e-24 114.8 95 55.8
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 9.0e-24 113.6 96 52.1
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.5e-23 112.8 101 51.5
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.0e-23 112.5 79 63.3
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 2.0e-23 112.5 97 50.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 5.8e-23 110.9 99 50.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.0e-22 110.2 88 58.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 1.3e-22 109.8 99 47.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.3e-22 109.8 98 50.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 1.3e-22 109.8 98 56.1
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 1.3e-22 109.8 98 56.1
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 2.9e-22 108.6 61 67.2
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.9e-22 108.6 90 53.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 6.5e-22 107.5 64 64.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.4e-21 106.3 65 67.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.4e-21 106.3 107 49.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.9e-21 105.9 97 51.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 3.2e-21 105.1 87 51.7
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 2.1e-20 102.4 117 43.6
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.7e-20 102.1 51 78.4
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.1e-20 100.9 55 72.7
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.0e-19 100.1 91 51.6
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.0e-19 98.6 49 83.7
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 3.9e-19 98.2 111 45.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.5e-18 96.3 89 43.8
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.5e-18 96.3 83 53.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 5.1e-11 71.2 93 37.6
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 1.3e-09 66.6 95 35.8


User provided reference genes

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