Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.1e-69 266.5 134 100.0
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 4.5e-44 181.4 145 69.7
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 5.6e-42 174.5 145 66.2
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 4.7e-41 171.4 146 66.4
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 6.1e-41 171.0 142 64.8
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 6.1e-41 171.0 142 64.8
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 2.3e-40 169.1 129 69.8
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 6.8e-40 167.5 142 63.4
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 6.8e-40 167.5 141 64.5
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.5e-39 166.4 141 63.8
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 2.6e-39 165.6 146 63.0
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 2.6e-39 165.6 146 63.0
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 3.7e-38 161.8 130 66.2
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 1.8e-32 142.9 138 57.2
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 3.9e-27 125.2 130 57.7
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 3.9e-19 98.6 111 45.0
BcaC08g45611 Brassica carinata HOM05D007960 ORTHO05D010026 1.2e-17 93.6 68 67.6
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 2.1e-17 92.8 113 44.2
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 2.8e-17 92.4 88 52.3
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.4e-16 90.1 120 45.0
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 1.4e-16 90.1 120 45.0
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 6.8e-16 87.8 110 45.5
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.2e-15 87.0 121 45.5
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 3.4e-15 85.5 100 45.0
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 3.4e-15 85.5 100 45.0
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 5.8e-15 84.7 124 43.5
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 7.6e-15 84.3 122 44.3
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 9.9e-15 84.0 121 46.3
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 6.4e-14 81.3 133 41.4
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 8.4e-14 80.9 115 41.7
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 7.1e-13 77.8 135 40.7
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 1.2e-12 77.0 70 58.6
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.2e-12 77.0 118 44.1
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 2.7e-12 75.9 111 43.2
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 3.5e-12 75.5 123 42.3
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 7.8e-12 74.3 130 40.8
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 8.6e-11 70.9 107 39.3
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 8.6e-11 70.9 122 38.5
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.5e-10 70.1 109 40.4
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.9e-10 69.7 93 41.9
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.5e-10 69.3 75 49.3
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.5e-10 69.3 75 49.3
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 2.5e-10 69.3 75 49.3
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 5.6e-10 68.2 125 36.8
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 9.6e-10 67.4 105 41.9
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.2e-09 67.0 136 33.8
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 3.6e-09 65.5 86 48.8
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 6.2e-09 64.7 66 45.5
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 8.1e-09 64.3 100 43.0
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 1.4e-08 63.5 79 41.8
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.4e-08 63.5 102 41.2
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 1.4e-08 63.5 85 50.6
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.8e-08 63.2 123 37.4
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 2.4e-08 62.8 137 34.3
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 5.2e-08 61.6 66 47.0
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 5.2e-08 61.6 120 43.3
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.2e-07 60.5 120 42.5
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.2e-07 60.5 112 38.4
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.2e-07 60.5 100 44.0
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 2.6e-07 59.3 62 53.2
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 3.4e-07 58.9 139 33.1
COL.COLO4_32178 Corchorus olitorius HOM05D007960 ORTHO05D010026 4.4e-07 58.5 57 47.4
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 5.8e-07 58.2 118 39.0
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 7.6e-07 57.8 121 34.7
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 7.6e-07 57.8 109 39.4
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 9.9e-07 57.4 89 43.8
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 9.9e-07 57.4 118 37.3
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 1.3e-06 57.0 122 38.5
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.2e-06 56.2 107 42.1
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.2e-06 56.2 110 40.0
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 3.8e-06 55.5 115 38.3
TWI15G0545 Tripterygium wilfordii HOM05D056897 ORTHO05D010026 4.9e-06 55.1 133 32.3


User provided reference genes

Program Settings