Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 3.9e-238 827.8 433 100.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 2.5e-176 622.5 429 76.9
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.0e-174 617.1 452 74.8
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 4.4e-173 611.7 442 75.1
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 6.3e-172 607.8 446 73.5
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.1e-171 607.1 444 74.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.0e-170 602.8 451 72.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 3.1e-166 589.0 441 72.8
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 8.9e-166 587.4 442 71.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.6e-165 585.9 442 71.5
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 8.3e-164 580.9 425 72.7
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 8.3e-164 580.9 425 72.7
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.1e-155 553.9 428 68.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.7e-122 443.0 449 54.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.5e-120 436.4 429 56.9
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 4.3e-120 435.6 423 55.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 9.6e-120 434.5 457 53.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 9.6e-120 434.5 406 57.6
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 4.8e-119 432.2 429 54.1
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.1e-118 431.0 431 55.2
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.9e-118 428.3 409 56.0
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.9e-116 422.2 440 54.3
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.4e-115 420.6 437 53.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 5.5e-115 418.7 404 55.2
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 4.6e-114 415.6 403 55.8
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.0e-114 415.2 432 53.5
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.3e-113 414.1 403 55.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.3e-113 413.3 440 54.1
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 5.1e-113 412.1 438 53.9
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 8.7e-113 411.4 380 57.1
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.1e-112 411.0 377 56.5
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.5e-112 409.8 431 51.7
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 9.6e-112 407.9 408 55.1
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 9.6e-112 407.9 436 52.8
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.3e-111 407.5 379 55.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.6e-111 407.1 382 56.3
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.8e-111 406.4 433 53.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 8.2e-111 404.8 429 53.1
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.4e-110 404.1 444 52.3
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.0e-110 402.5 422 52.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 4.0e-110 402.5 431 53.4
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 6.9e-110 401.7 440 51.8
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.0e-109 400.2 411 55.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 4.5e-109 399.1 434 51.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.8e-109 398.7 422 52.8
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.6e-109 398.3 440 50.2
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.0e-108 397.9 434 50.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.7e-108 397.1 422 52.4
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.7e-108 397.1 425 52.0
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.9e-108 396.4 448 52.0
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 3.8e-108 396.0 385 55.6
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.0e-108 395.6 423 52.0
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 6.5e-108 395.2 438 51.8
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 8.4e-108 394.8 408 52.7
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 7.1e-107 391.7 383 55.1
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 9.3e-107 391.3 438 51.1
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 9.3e-107 391.3 378 54.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.7e-106 389.8 437 50.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 2.7e-106 389.8 378 54.0
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 2.7e-106 389.8 428 51.2
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 4.6e-106 389.0 392 53.3
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 4.6e-106 389.0 439 49.7
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 1.5e-104 384.0 413 51.3
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 9.7e-104 381.3 417 50.6
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 4.5e-101 372.5 416 49.5
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.9e-100 369.8 399 53.9
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.9e-100 369.8 424 49.5
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.1e-99 367.9 349 55.6
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.4e-99 367.5 423 51.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 3.2e-99 366.3 392 50.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.3e-97 360.1 397 48.9
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 2.5e-96 356.7 405 49.9
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 3.7e-95 352.8 389 49.4
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.3e-89 333.6 387 45.7
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 6.3e-87 325.5 356 50.8
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.1e-86 324.7 345 53.6
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 2.7e-82 310.1 334 49.4
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.7e-82 309.3 388 46.9
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.0e-81 308.1 388 46.6
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.5e-72 277.7 342 45.3
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 3.4e-72 276.6 289 50.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 9.8e-72 275.0 304 51.6
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 4.8e-71 272.7 289 50.9
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 8.3e-71 271.9 412 37.9
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.2e-69 268.1 394 39.3
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 4.9e-63 246.1 430 36.0
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.0e-60 238.4 380 36.6
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.3e-60 237.3 382 37.7
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 8.3e-55 218.8 308 42.9
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 2.9e-52 210.3 293 42.0
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.7e-47 194.5 243 44.9
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 3.2e-46 190.3 394 34.5
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 8.6e-44 182.2 244 49.6
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 6.8e-41 172.6 398 31.4
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 1.6e-37 161.4 218 41.3
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.3e-36 158.3 594 23.6
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 5.6e-35 152.9 236 41.1
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.2e-29 135.2 118 60.2
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.1e-26 124.4 130 52.3
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 9.9e-24 115.5 126 46.0
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.1e-20 103.2 84 64.3
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 2.5e-19 100.9 114 49.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.5e-16 91.7 292 28.1
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.3e-15 88.6 84 51.2
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.2e-15 87.8 75 57.3
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 4.9e-15 86.7 81 55.6
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.4e-14 85.1 65 67.7
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 7.1e-14 82.8 94 47.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 3.0e-12 77.4 92 47.8
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.1e-06 58.9 60 51.7
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.4e-06 58.5 37 75.7
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 9.3e-06 55.8 65 44.6


User provided reference genes

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