Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.4e-187 659.4 322 100.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 1.0e-102 377.5 241 74.3
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 5.1e-102 375.2 243 74.5
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 4.4e-101 372.1 235 75.7
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 4.4e-101 372.1 238 75.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 4.4e-101 372.1 244 75.0
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 5.7e-101 371.7 269 69.1
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 9.7e-101 370.9 238 74.4
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.3e-100 370.5 238 74.8
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.8e-97 359.0 261 67.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.2e-96 355.9 232 74.1
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 4.2e-96 355.5 240 71.2
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 5.2e-86 322.0 235 64.7
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 6.8e-86 321.6 199 72.9
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.2e-85 320.9 223 66.4
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 2.0e-85 320.1 229 64.2
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 2.0e-85 320.1 218 66.5
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 5.7e-85 318.5 220 66.4
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 2.2e-84 316.6 215 67.4
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.2e-84 316.6 224 66.5
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 6.3e-84 315.1 213 66.2
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 1.1e-83 314.3 200 70.0
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 1.8e-83 313.5 221 65.2
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.8e-83 313.5 216 65.7
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 4.1e-83 312.4 199 71.4
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 5.4e-83 312.0 239 62.8
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 5.4e-83 312.0 236 63.6
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 7.0e-83 311.6 202 69.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 7.0e-83 311.6 226 64.2
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 7.0e-83 311.6 227 64.3
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 7.0e-83 311.6 215 67.0
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.2e-82 310.8 242 62.0
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.2e-82 310.8 228 64.0
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.2e-82 310.8 240 60.4
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.6e-82 310.5 199 69.8
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 2.0e-82 310.1 204 67.6
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 3.5e-82 309.3 202 67.8
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 4.5e-82 308.9 216 66.7
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 7.7e-82 308.1 229 61.6
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.7e-82 308.1 233 61.8
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.3e-81 307.4 198 69.2
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.3e-81 307.4 197 71.1
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 1.7e-81 307.0 227 63.0
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.2e-81 306.6 205 68.3
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.9e-81 306.2 216 66.2
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.9e-81 306.2 194 71.1
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 3.8e-81 305.8 195 70.8
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 5.0e-81 305.4 237 59.1
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 6.5e-81 305.1 202 67.8
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 8.5e-81 304.7 237 58.6
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 8.5e-81 304.7 242 60.7
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-80 304.3 243 58.4
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.9e-80 303.5 233 60.9
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 3.2e-80 302.8 202 67.8
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 3.2e-80 302.8 202 67.8
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 3.2e-80 302.8 198 67.7
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 7.2e-80 301.6 234 62.4
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 7.2e-80 301.6 246 58.1
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 9.4e-80 301.2 235 60.0
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 3.6e-79 299.3 222 63.5
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 3.6e-79 299.3 200 66.5
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.6e-79 299.3 205 67.3
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.2e-77 294.3 215 64.2
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.4e-77 292.7 207 64.7
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.5e-77 291.6 242 57.0
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.3e-76 290.8 226 57.5
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.7e-76 290.4 201 63.2
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 2.8e-76 289.7 196 65.3
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 3.7e-76 289.3 203 63.5
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 4.9e-76 288.9 209 62.2
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 8.3e-76 288.1 203 63.1
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.3e-76 288.1 217 61.3
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 8.3e-76 288.1 198 66.2
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.0e-75 285.0 227 59.9
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.6e-74 283.9 239 55.6
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 6.6e-73 278.5 202 61.9
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.3e-72 276.2 173 72.3
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 7.3e-72 275.0 163 74.2
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 9.5e-72 274.6 197 65.5
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 6.1e-71 271.9 196 64.3
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 1.4e-70 270.8 209 64.6
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 9.8e-69 264.6 205 60.5
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.4e-67 260.0 213 55.4
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 4.1e-67 259.2 195 59.0
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 5.4e-67 258.8 179 67.0
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.7e-66 256.5 207 57.5
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 7.8e-66 255.0 173 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.5e-64 250.0 194 59.3
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 4.3e-64 249.2 194 58.2
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.0e-62 244.6 174 63.8
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.1e-62 243.0 177 66.7
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.1e-56 224.6 173 61.3
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.9e-56 223.8 134 73.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.8e-54 217.2 175 57.1
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 8.9e-54 214.9 140 67.9
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.1e-51 208.0 166 57.2
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.5e-48 197.6 201 47.8
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 2.6e-45 186.8 220 45.5
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.9e-44 182.6 213 46.0
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.1e-43 179.5 112 69.6
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 3.3e-40 169.9 121 62.8
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.9e-36 156.0 104 63.5
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.1e-35 154.8 182 39.6
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.7e-34 150.2 90 74.4
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 7.3e-32 142.1 144 47.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.9e-27 127.5 80 71.2
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 4.2e-27 126.3 89 61.8
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-19 101.7 60 76.7
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 3.2e-19 100.1 57 73.7
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 7.1e-19 99.0 70 61.4
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.3e-16 90.1 84 54.8
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 9.0e-14 82.0 77 48.1
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.7e-12 77.8 54 64.8
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.2e-12 77.4 67 49.3
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 4.9e-12 76.3 54 57.4
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 6.3e-07 59.3 91 38.5
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 6.3e-07 59.3 91 38.5
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 6.3e-07 59.3 91 38.5
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 6.3e-07 59.3 91 38.5
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.8e-06 57.8 90 37.8
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 9.0e-06 55.5 33 69.7


User provided reference genes

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