Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 2.3e-54 215.3 109 100.0
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 1.0e-41 173.3 111 80.2
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 1.7e-41 172.6 111 81.1
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 5.5e-40 167.5 111 77.5
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 2.1e-39 165.6 111 77.5
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 2.7e-39 165.2 111 75.7
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 3.6e-39 164.9 111 75.7
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 2.3e-38 162.2 112 75.0
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 4.0e-38 161.4 112 75.0
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 1.2e-37 159.8 112 75.0
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 2.2e-36 155.6 112 73.2
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 2.8e-36 155.2 113 75.2
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 5.0e-33 144.4 113 71.7
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 1.5e-32 142.9 113 70.8
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 5.2e-30 134.4 109 65.1
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 1.1e-19 100.1 108 54.6
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 6.6e-17 90.9 106 48.1
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 7.3e-16 87.4 105 45.7
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 7.3e-16 87.4 106 46.2
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 7.3e-16 87.4 107 47.7
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 9.5e-16 87.0 105 47.6
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 1.2e-15 86.7 103 48.5
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.2e-15 86.7 107 46.7
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.2e-15 86.7 106 46.2
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 2.1e-15 85.9 105 49.5
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 2.8e-15 85.5 100 51.0
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 3.6e-15 85.1 109 45.9
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 4.7e-15 84.7 103 53.4
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 4.0e-14 81.6 89 49.4
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 5.8e-13 77.8 105 51.4
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 7.5e-13 77.4 101 42.6
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 1.3e-12 76.6 108 41.7
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 1.3e-12 76.6 108 41.7
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 1.7e-12 76.3 100 43.0
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 3.7e-12 75.1 102 48.0
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 6.4e-12 74.3 91 46.2
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 8.3e-12 73.9 100 43.0
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 1.1e-11 73.6 105 43.8
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 1.4e-11 73.2 100 43.0
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 3.2e-11 72.0 109 43.1
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 7.0e-11 70.9 85 51.8
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 1.2e-10 70.1 88 50.0
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 1.2e-10 70.1 105 41.0
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 2.7e-10 68.9 100 43.0
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 3.5e-10 68.6 92 43.5
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 4.6e-10 68.2 101 42.6
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 6.0e-10 67.8 101 42.6
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 1.0e-09 67.0 91 45.1
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.0e-09 67.0 101 43.6
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 2.3e-09 65.9 95 40.0
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 1.1e-08 63.5 116 41.4
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 1.9e-08 62.8 89 38.2
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 1.9e-08 62.8 91 47.3
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 1.2e-07 60.1 119 38.7
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 1.2e-07 60.1 100 33.0
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 1.6e-07 59.7 86 43.0
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 3.6e-07 58.5 96 37.5
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 1.8e-06 56.2 84 38.1
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 3.1e-06 55.5 79 40.5
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 5.2e-06 54.7 69 47.8
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 8.9e-06 53.9 63 46.0
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 8.9e-06 53.9 100 35.0


User provided reference genes

Program Settings