Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.8e-201 705.7 357 100.0
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 2.6e-195 685.3 354 98.6
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 3.1e-172 608.6 354 86.4
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 5.2e-172 607.8 354 87.0
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 6.8e-172 607.4 354 86.4
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 1.2e-171 606.7 354 86.4
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 4.4e-171 604.7 356 84.8
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 2.7e-168 595.5 354 85.9
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 1.1e-166 590.1 354 83.3
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 2.4e-156 555.8 356 75.8
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 1.3e-154 550.1 356 76.1
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.3e-154 550.1 356 77.2
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 8.4e-154 547.4 355 75.8
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 1.1e-153 547.0 356 75.8
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 1.4e-153 546.6 356 75.0
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 7.1e-153 544.3 356 75.3
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 1.2e-152 543.5 356 74.7
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 2.1e-152 542.7 356 73.6
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 3.5e-152 542.0 356 74.4
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.9e-152 540.8 356 73.6
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.9e-152 540.8 356 73.6
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 7.9e-152 540.8 356 73.6
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 1.3e-151 540.0 356 74.2
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 3.9e-151 538.5 356 74.4
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 8.7e-151 537.3 356 74.2
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 1.1e-150 537.0 356 73.3
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 1.1e-150 537.0 356 78.1
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 4.3e-150 535.0 356 73.3
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 9.6e-150 533.9 356 77.8
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 1.3e-149 533.5 356 73.0
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 2.8e-149 532.3 356 73.6
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 6.2e-149 531.2 356 73.6
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 8.1e-149 530.8 356 73.0
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 1.1e-148 530.4 355 73.8
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 1.8e-148 529.6 356 73.0
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 4.0e-148 528.5 358 72.6
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 5.3e-148 528.1 355 76.9
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 6.9e-148 527.7 356 71.3
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 6.9e-148 527.7 356 73.0
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 3.4e-147 525.4 356 73.3
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 1.3e-146 523.5 356 73.3
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 3.8e-146 521.9 357 73.1
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 6.4e-146 521.2 356 72.2
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 1.1e-145 520.4 358 71.5
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 1.1e-145 520.4 356 76.4
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 1.4e-145 520.0 356 72.2
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 4.2e-145 518.5 356 71.3
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 5.5e-145 518.1 355 71.5
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 9.3e-145 517.3 354 72.0
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 1.6e-144 516.5 355 71.0
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 2.1e-144 516.2 357 72.3
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 6.0e-144 514.6 355 72.1
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 7.9e-144 514.2 356 70.8
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 7.9e-144 514.2 356 70.8
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 7.9e-144 514.2 358 70.4
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 7.9e-144 514.2 356 71.6
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 1.3e-143 513.5 356 71.1
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 3.0e-143 512.3 358 70.7
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 3.0e-143 512.3 358 70.4
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 3.9e-143 511.9 356 72.5
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 3.9e-143 511.9 356 71.1
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 3.9e-143 511.9 355 70.7
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 3.9e-143 511.9 356 70.8
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 6.7e-143 511.1 355 70.4
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 6.7e-143 511.1 443 61.6
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 8.7e-143 510.8 356 70.5
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 8.7e-143 510.8 356 70.5
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 1.1e-142 510.4 356 70.8
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 1.5e-142 510.0 369 69.1
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 2.5e-142 509.2 356 70.8
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 3.3e-142 508.8 356 70.2
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 7.4e-142 507.7 356 70.5
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 7.4e-142 507.7 356 70.5
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 1.3e-141 506.9 356 70.8
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 1.3e-141 506.9 356 71.9
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 2.1e-141 506.1 356 70.2
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 4.0e-140 501.9 355 70.1
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 5.3e-140 501.5 356 69.9
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 9.0e-140 500.7 356 69.7
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 3.4e-139 498.8 359 71.0
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 5.8e-139 498.0 356 69.4
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 3.8e-138 495.4 355 69.9
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 3.8e-138 495.4 356 70.2
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 3.8e-138 495.4 356 70.2
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 6.5e-138 494.6 356 69.9
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 1.9e-137 493.0 356 69.9
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 4.2e-137 491.9 357 68.3
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 1.6e-136 490.0 358 69.6
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 3.0e-135 485.7 356 67.4
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 3.9e-135 485.3 356 66.9
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 3.9e-135 485.3 356 66.9
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 1.1e-134 483.8 356 68.3
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 2.5e-134 482.6 355 69.0
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 8.2e-133 477.6 381 64.8
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 5.3e-132 474.9 355 67.3
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 8.5e-130 467.6 359 67.7
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 4.2e-129 465.3 359 65.5
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 2.1e-128 463.0 358 63.4
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 2.2e-125 453.0 389 62.7
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 2.8e-125 452.6 354 64.7
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 8.2e-125 451.1 354 62.4
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 1.5e-123 446.8 356 64.9
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 1.2e-120 437.2 261 82.0
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 3.6e-120 435.6 361 60.7
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.8e-119 433.3 358 59.2
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 1.4e-116 423.7 357 61.3
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 1.3e-114 417.2 303 69.6
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 3.0e-111 406.0 357 54.9
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 9.7e-110 401.0 357 58.8
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 6.3e-109 398.3 356 58.4
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.4e-108 397.1 357 54.6
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 1.9e-105 386.7 228 78.9
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 3.3e-102 375.9 354 57.3
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 1.2e-99 367.5 357 51.8
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 3.8e-98 362.5 355 50.7
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 7.5e-94 348.2 356 48.3
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 3.0e-87 326.2 353 47.0
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 6.3e-85 318.5 354 46.9
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 1.2e-78 297.7 356 48.3
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 6.8e-71 271.9 242 57.4
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 1.2e-70 271.2 360 41.4
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.3e-66 257.7 358 43.0
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 1.1e-39 168.3 366 30.3
C02p30110 Brassica napus HOM05D005576 ORTHO05D007010 2.0e-38 164.1 145 59.3
BcaB05g24764 Brassica carinata HOM05D005576 ORTHO05D007010 7.6e-38 162.2 123 73.2
BolC2t09060H Brassica oleracea HOM05D005576 ORTHO05D007010 2.5e-33 147.1 144 56.2
BcaB05g24763 Brassica carinata HOM05D000046 ORTHO05D000457 9.3e-28 128.6 85 74.1
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 1.9e-25 120.9 347 26.8
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 4.9e-21 106.3 344 23.8
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.2e-13 80.9 65 61.5


User provided reference genes

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