Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.6e-66 255.4 140 100.0
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.4e-35 152.5 130 70.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 9.0e-35 150.6 113 77.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 2.6e-34 149.1 113 75.2
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.6e-34 149.1 104 78.8
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 9.9e-34 147.1 113 76.1
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 9.9e-34 147.1 108 76.9
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 2.9e-33 145.6 102 79.4
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 2.9e-33 145.6 132 65.2
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 8.4e-33 144.1 102 78.4
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 2.4e-32 142.5 101 77.2
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 7.1e-32 141.0 95 80.0
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 2.1e-31 139.4 106 76.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.5e-31 138.7 117 68.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 4.6e-31 138.3 101 76.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 9.9e-26 120.6 114 64.9
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.4e-24 116.7 90 67.8
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.4e-24 115.9 104 59.6
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 4.2e-24 115.2 126 54.8
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 5.5e-24 114.8 119 55.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 5.5e-24 114.8 122 56.6
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 7.1e-24 114.4 91 67.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 9.3e-24 114.0 126 54.8
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.2e-23 113.6 90 65.6
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.2e-23 113.6 94 63.8
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.2e-23 113.6 124 49.2
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.6e-23 113.2 122 55.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.6e-23 113.2 108 57.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.6e-23 113.2 121 55.4
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.1e-23 112.8 124 55.6
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.1e-23 112.8 98 60.2
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.7e-23 112.5 111 58.6
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.5e-23 112.1 94 63.8
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.5e-23 112.1 103 59.2
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 4.6e-23 111.7 111 57.7
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 6.0e-23 111.3 90 65.6
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 7.9e-23 110.9 124 54.8
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 7.9e-23 110.9 122 53.3
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 7.9e-23 110.9 122 51.6
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.0e-22 110.5 102 59.8
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.3e-22 110.2 104 57.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.3e-22 110.2 95 61.1
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.3e-22 110.2 126 50.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 2.3e-22 109.4 91 62.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.3e-22 109.4 121 51.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.3e-22 109.4 104 57.7
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.3e-22 109.4 135 46.7
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 3.0e-22 109.0 104 54.8
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.0e-22 109.0 137 49.6
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 3.9e-22 108.6 90 62.2
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 3.9e-22 108.6 113 53.1
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.9e-22 108.6 91 62.6
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.9e-22 108.6 135 45.9
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.1e-22 108.2 104 53.8
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 5.1e-22 108.2 91 60.4
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 6.7e-22 107.8 104 57.7
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 6.7e-22 107.8 122 51.6
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.7e-22 107.8 122 51.6
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.7e-22 107.8 122 51.6
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 6.7e-22 107.8 104 55.8
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 8.7e-22 107.5 100 57.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 8.7e-22 107.5 107 55.1
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-21 107.1 122 51.6
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.1e-21 107.1 91 60.4
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.1e-21 107.1 90 63.3
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.9e-21 106.3 104 58.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.9e-21 106.3 106 54.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.9e-21 106.3 90 61.1
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.5e-21 105.9 136 47.8
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 2.5e-21 105.9 106 52.8
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.5e-21 105.9 129 48.8
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 3.3e-21 105.5 92 57.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 3.3e-21 105.5 106 56.6
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.3e-21 105.5 95 56.8
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 4.3e-21 105.1 117 52.1
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 4.3e-21 105.1 94 59.6
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 5.6e-21 104.8 101 56.4
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 7.4e-21 104.4 96 58.3
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 7.4e-21 104.4 122 48.4
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.3e-20 103.6 102 52.9
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.6e-20 103.2 97 56.7
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.1e-20 102.8 99 60.6
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 3.7e-20 102.1 89 59.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.7e-20 102.1 115 51.3
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.7e-20 102.1 100 56.0
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 3.7e-20 102.1 95 56.8
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 6.2e-20 101.3 97 57.7
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.8e-19 99.8 91 53.8
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.8e-19 99.8 82 65.9
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 4.0e-19 98.6 78 66.7
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.5e-18 96.7 114 50.0
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.0e-18 96.3 97 55.7
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.6e-18 95.9 82 57.3
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 5.8e-18 94.7 76 64.5
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 7.6e-18 94.4 89 59.6
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.0e-17 94.0 147 40.1
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.3e-17 93.6 102 51.0
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.9e-17 92.4 99 48.5
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.7e-15 85.9 82 56.1
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 2.7e-15 85.9 91 45.1
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.8e-14 83.2 136 38.2
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.0e-14 82.4 72 59.7
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.9e-13 79.7 96 40.6
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.6e-12 76.6 82 50.0
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.6e-12 76.6 68 58.8
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.7e-12 75.5 66 60.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 8.2e-12 74.3 100 43.0
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.4e-11 72.8 50 70.0
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 4.1e-11 72.0 91 39.6
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-10 69.3 108 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 3.4e-10 68.9 93 38.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.7e-09 66.6 109 38.5
C06p30180 Brassica napus HOM05D068201 ORTHO05D042045 4.6e-07 58.5 87 41.4
BolC6t38181H Brassica oleracea HOM05D068201 ORTHO05D042045 4.6e-07 58.5 87 41.4


User provided reference genes

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