Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G18690 Aethionema arabicum HOM05D008738 ORTHO05D010755 9.1e-100 367.1 209 100.0
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 1.1e-65 253.8 217 62.7
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 4.7e-64 248.4 217 61.3
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 6.8e-63 244.6 217 60.4
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 5.8e-62 241.5 217 60.4
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-60 237.3 212 59.4
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 1.6e-59 233.4 217 58.1
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 1.4e-55 220.3 214 57.0
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 1.4e-55 220.3 214 57.5
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 1.4e-55 220.3 214 57.5
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 3.1e-55 219.2 209 58.9
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.0e-54 216.5 209 57.9
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 5.8e-54 214.9 217 55.3
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 7.5e-54 214.5 217 55.3
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.1e-52 210.7 210 56.2
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 1.6e-51 206.8 218 53.7
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 2.1e-51 206.5 217 53.9
BraA09t39817Z Brassica rapa HOM05D008738 ORTHO05D010755 2.1e-51 206.5 217 57.1
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 2.7e-51 206.1 217 57.6
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 2.7e-51 206.1 217 53.0
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 3.5e-51 205.7 163 68.1
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 6.6e-50 201.4 162 65.4
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 7.3e-49 198.0 205 57.1
AT3G50450 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 5.4e-44 181.8 209 51.2
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.1e-41 174.1 215 47.9
A09p43550 Brassica napus HOM05D008738 ORTHO05D010755 1.1e-41 174.1 217 48.8
BcaC06g33094 Brassica carinata HOM05D008738 ORTHO05D010755 1.6e-40 170.2 211 48.3
A03p47800 Brassica napus HOM05D008738 ORTHO05D010755 5.8e-38 161.8 213 47.9
BraA03t13890Z Brassica rapa HOM05D008738 ORTHO05D010755 5.8e-38 161.8 213 47.9
C08p25540 Brassica napus HOM05D008738 ORTHO05D010755 4.8e-32 142.1 148 56.1
Aa31LG4G18680 Aethionema arabicum HOM05D008738 ORTHO05D010755 1.7e-29 133.7 147 49.7
BcaB01g00612 Brassica carinata HOM05D008738 ORTHO05D010755 2.2e-21 106.7 144 45.1
BcaC06g33093 Brassica carinata HOM05D008738 ORTHO05D010755 3.0e-18 96.3 145 40.0
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 2.5e-09 66.6 142 26.8
Nn5g29352 Nelumbo nucifera HOM05D000529 ORTHO05D000472 2.2e-08 63.5 144 27.8
RcHm_v2.0_Chr2g0104171 Rosa chinensis HOM05D000529 ORTHO05D000472 2.2e-08 63.5 143 28.0
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 2.8e-08 63.2 137 29.2
GSVIVG01007144001 Vitis vinifera HOM05D000529 ORTHO05D000472 2.8e-08 63.2 117 31.6
Oeu005309.1 Olea europaea HOM05D000529 ORTHO05D000472 4.8e-08 62.4 141 28.4
CiPaw.02G010900 Carya illinoinensis HOM05D008738 ORTHO05D010755 6.3e-08 62.0 150 26.7
MD15G1276900 Malus domestica HOM05D000529 ORTHO05D000472 8.2e-08 61.6 116 31.0
Prupe.7G139800 Prunus persica HOM05D000529 ORTHO05D000472 1.4e-07 60.8 141 25.5
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 4.1e-07 59.3 137 30.7
FvH4_1g15120 Fragaria vesca HOM05D000529 ORTHO05D000472 5.3e-07 58.9 138 29.7
Sabra07G0034600 Salix brachista HOM05D037871 ORTHO05D010755 5.3e-07 58.9 163 25.8
Cc07_g05700 Coffea canephora HOM05D000529 ORTHO05D000472 9.0e-07 58.2 146 29.5
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 1.2e-06 57.8 143 28.7
CiPaw.02G011200 Carya illinoinensis HOM05D008738 ORTHO05D010755 1.5e-06 57.4 124 28.2
FAN26G3207 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.5e-06 57.4 138 29.0
GSVIVG01003569001 Vitis vinifera HOM05D000529 ORTHO05D019823 1.5e-06 57.4 117 30.8
AT3G50480 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.0e-06 57.0 141 31.2
Nitab4.5_0000681g0070 Nicotiana tabacum HOM05D000529 ORTHO05D010311 2.0e-06 57.0 142 28.2
Nitab4.5_0024858g0010 Nicotiana tabacum HOM05D000529 ORTHO05D010311 2.0e-06 57.0 142 28.9
FAN19G1335 Fragaria x ananassa HOM05D008495 ORTHO05D022578 2.6e-06 56.6 147 32.0
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 2.6e-06 56.6 147 29.3
MD02G1164700 Malus domestica HOM05D000529 ORTHO05D000472 3.4e-06 56.2 116 31.9
TWI09G1247 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 3.4e-06 56.2 146 24.7
Haze_15448 Corylus avellana HOM05D000529 ORTHO05D000472 4.5e-06 55.8 146 26.7
Dinv29950 Davidia involucrata HOM05D000529 ORTHO05D000472 4.5e-06 55.8 140 28.6
Prupe.5G127900 Prunus persica HOM05D000529 ORTHO05D012517 5.9e-06 55.5 149 22.8
QL06p042852 Quercus lobata HOM05D000529 ORTHO05D000472 5.9e-06 55.5 147 25.2
C07p45760 Brassica napus HOM05D008738 ORTHO05D010755 7.7e-06 55.1 86 41.9
GSVIVG01003571001 Vitis vinifera HOM05D000529 ORTHO05D000472 7.7e-06 55.1 117 29.1
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 1.0e-05 54.7 132 31.1
GSVIVG01003565001 Vitis vinifera HOM05D000529 ORTHO05D000472 1.0e-05 54.7 117 28.2


User provided reference genes

Program Settings