Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 0.0e+00 1346.3 674 100.0
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 1.9e-247 859.4 666 67.7
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 2.2e-243 845.9 681 65.2
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 4.2e-239 831.6 668 66.3
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 7.2e-239 830.9 667 65.2
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 1.4e-237 826.6 667 64.8
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 7.2e-223 777.7 660 62.9
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 6.7e-221 771.2 661 62.5
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 2.8e-219 765.8 659 62.1
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 2.4e-218 762.7 665 62.1
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 7.7e-217 757.7 666 61.6
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 7.5e-188 661.4 451 73.8
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.1e-183 647.5 581 60.9
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 1.1e-183 647.5 623 57.0
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 4.8e-134 482.6 717 42.1
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 2.2e-131 473.8 709 42.0
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 2.4e-125 453.8 725 40.8
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 9.1e-125 451.8 724 37.8
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 5.0e-123 446.0 704 40.5
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 8.5e-123 445.3 697 40.6
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 8.5e-123 445.3 728 39.1
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 7.2e-122 442.2 708 39.8
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.4e-120 438.0 713 39.1
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.1e-120 436.0 706 39.7
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.3e-119 433.3 706 39.7
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 7.4e-119 432.2 718 38.6
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 4.8e-118 429.5 712 39.2
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 4.8e-118 429.5 728 39.0
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.3e-117 426.0 712 39.0
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.8e-115 419.9 742 37.9
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 3.2e-114 416.8 699 38.5
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 4.2e-114 416.4 693 39.0
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 2.7e-113 413.7 699 39.6
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.7e-110 404.4 716 36.6
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 3.7e-110 403.3 697 38.9
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 4.8e-110 402.9 705 37.2
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 2.4e-109 400.6 706 36.4
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.1e-109 399.8 697 38.6
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 2.6e-108 397.1 709 37.4
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 1.3e-107 394.8 634 38.3
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.4e-104 384.8 708 35.6
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 1.5e-103 381.3 625 37.1
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 2.2e-102 377.5 720 37.5
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 6.3e-102 375.9 716 34.8
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 7.0e-101 372.5 627 37.0
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 1.6e-100 371.3 710 36.3
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 7.7e-100 369.0 697 35.4
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 1.7e-99 367.9 700 34.0
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 3.8e-99 366.7 710 35.5
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 2.5e-98 364.0 702 36.0
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 4.2e-98 363.2 710 35.6
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 7.2e-98 362.5 714 35.3
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 3.6e-97 360.1 728 34.6
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 3.6e-97 360.1 632 35.4
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 6.1e-97 359.4 696 34.8
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.8e-96 357.8 706 35.7
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 3.4e-95 353.6 685 34.5
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 3.7e-94 350.1 710 34.1
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.8e-94 349.7 697 34.0
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 9.1e-93 345.5 665 35.3
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 5.9e-92 342.8 720 33.3
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 1.3e-91 341.7 716 33.9
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 1.3e-91 341.7 709 33.6
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 2.9e-91 340.5 598 37.1
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 2.9e-91 340.5 693 34.3
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 7.2e-90 335.9 668 34.4
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 1.6e-89 334.7 665 36.1
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 2.1e-89 334.3 716 33.1
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 8.0e-89 332.4 740 32.4
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 8.0e-89 332.4 576 38.4
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 8.0e-89 332.4 601 36.9
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 1.0e-88 332.0 720 33.2
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 8.9e-88 328.9 727 32.5
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 1.2e-84 318.5 696 33.3
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 3.5e-84 317.0 707 31.5
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 2.9e-83 313.9 608 34.2
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 1.6e-81 308.1 396 42.9
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 2.1e-81 307.8 696 32.5
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 2.3e-80 304.3 672 33.3
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 5.8e-79 299.7 591 34.0
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 7.5e-79 299.3 702 32.9
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 4.1e-77 293.5 595 33.6
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.3e-75 288.5 569 33.6
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 3.1e-72 277.3 759 29.8
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.3e-70 271.9 421 39.0
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 4.9e-70 270.0 678 30.8
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 6.4e-70 269.6 676 32.0
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.4e-69 268.5 677 30.9
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 1.6e-68 265.0 432 36.6
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.3e-67 261.9 685 30.1
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 5.6e-66 256.5 722 31.0
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 6.8e-64 249.6 328 43.6
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 7.6e-63 246.1 682 30.4
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 1.3e-62 245.4 682 30.5
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 3.7e-62 243.8 677 29.5
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 3.9e-59 233.8 689 29.5
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 8.1e-49 199.5 369 36.3
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 1.3e-46 192.2 421 33.3
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.3e-42 176.4 191 52.9
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.1e-37 162.5 355 32.7
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.9e-37 161.8 297 37.0
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 3.9e-35 154.1 353 33.1
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 2.5e-29 134.8 132 53.0
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 8.2e-25 119.8 208 35.6
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 5.7e-18 97.1 95 54.7
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 4.8e-17 94.0 137 39.4
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 4.1e-16 90.9 527 23.1
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.6e-15 88.2 64 70.3
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.6e-15 88.2 64 70.3
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.4e-13 82.4 224 31.7
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.2e-12 79.3 265 26.0
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.2e-09 68.6 401 24.4
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.5e-07 62.4 171 32.7
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 4.5e-07 60.8 87 39.1
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.2e-06 58.5 57 56.1
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 3.8e-06 57.8 137 30.7
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 6.5e-06 57.0 80 41.2


User provided reference genes

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