Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 4.8e-143 511.5 337 100.0
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 9.2e-94 347.8 355 67.6
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.6e-90 337.0 354 62.1
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 2.6e-88 329.7 354 64.4
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 3.7e-87 325.9 336 72.6
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 2.7e-85 319.7 337 68.8
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 4.6e-85 318.9 338 70.4
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 9.6e-83 311.2 336 67.6
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 2.6e-80 303.1 337 64.4
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 2.6e-80 303.1 337 64.4
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 2.9e-79 299.7 337 63.8
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.4e-78 296.6 335 69.0
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 2.4e-78 296.6 335 71.3
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 2.9e-71 273.1 357 58.0
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 3.2e-70 269.6 323 67.5
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.4e-62 244.2 349 56.7
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 2.4e-62 243.4 339 58.4
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 3.2e-62 243.0 347 57.9
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 4.2e-62 242.7 346 55.5
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 3.9e-60 236.1 340 54.4
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 5.6e-59 232.3 356 61.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 9.6e-59 231.5 339 47.2
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.8e-57 227.3 359 58.8
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.2e-56 224.6 372 52.4
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.4e-56 223.0 352 58.8
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 4.5e-56 222.6 343 52.8
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 5.8e-56 222.2 357 56.3
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 7.6e-56 221.9 367 55.6
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 7.6e-56 221.9 359 47.1
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 7.6e-56 221.9 351 54.7
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.0e-55 221.5 371 49.6
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.3e-55 221.1 343 46.9
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.7e-55 220.7 346 57.8
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.7e-55 220.7 351 49.0
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 1.7e-55 220.7 348 55.5
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 4.9e-55 219.2 373 53.4
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 4.9e-55 219.2 349 55.0
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 8.4e-55 218.4 335 55.2
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 8.4e-55 218.4 339 56.0
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 1.4e-54 217.6 359 46.2
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 2.5e-54 216.9 345 54.2
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 4.2e-54 216.1 352 48.3
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 5.5e-54 215.7 353 55.8
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 1.6e-53 214.2 363 48.5
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.6e-53 214.2 373 52.5
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 2.7e-53 213.4 390 53.3
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.7e-53 213.4 356 53.7
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 2.7e-53 213.4 342 58.2
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 3.5e-53 213.0 378 55.0
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 6.0e-53 212.2 359 55.4
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 6.0e-53 212.2 380 48.4
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 3.9e-52 209.5 370 55.4
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 3.9e-52 209.5 360 55.3
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 6.7e-52 208.8 339 51.3
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 6.7e-52 208.8 369 52.0
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.1e-51 208.0 374 56.7
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.1e-51 208.0 379 50.9
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 1.5e-51 207.6 360 53.1
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.5e-51 207.6 362 55.8
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.5e-51 206.8 354 52.5
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.5e-51 206.8 354 52.5
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 2.5e-51 206.8 365 54.0
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.3e-51 206.5 365 54.0
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 9.6e-51 204.9 363 52.1
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.8e-50 202.6 364 51.6
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 8.2e-50 201.8 368 51.4
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 8.2e-50 201.8 356 53.7
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.4e-49 201.1 382 54.2
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 5.3e-49 199.1 355 52.4
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 7.6e-48 195.3 374 48.9
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.0e-47 194.9 373 42.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.3e-47 194.5 379 47.8
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 1.3e-47 194.5 345 55.4
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.2e-47 193.7 341 43.4
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 6.5e-47 192.2 359 55.4
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 6.5e-47 192.2 379 48.8
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 8.4e-47 191.8 363 54.3
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.5e-46 190.3 343 42.0
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 5.5e-46 189.1 381 49.3
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 7.2e-46 188.7 348 53.4
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 7.4e-43 178.7 373 51.5
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 4.1e-41 172.9 403 44.9
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 6.9e-41 172.2 402 45.5
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 6.9e-41 172.2 345 49.3
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 3.8e-39 166.4 362 37.8
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 5.0e-39 166.0 348 45.7
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 8.5e-39 165.2 337 48.1
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.0e-36 158.3 295 51.5
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 3.0e-36 156.8 385 39.7
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.7e-34 151.0 179 52.5
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 3.7e-34 149.8 268 53.0
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 3.7e-34 149.8 168 53.0
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 8.2e-34 148.7 342 42.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.8e-33 147.5 156 56.4
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.0e-32 144.1 401 43.1
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 3.0e-28 130.2 245 50.2
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 8.8e-28 128.6 284 51.1
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.1e-27 128.3 496 28.8
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 5.7e-27 125.9 197 43.1
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.7e-26 124.4 130 55.4
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.4e-25 121.3 127 52.0
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 9.1e-25 118.6 128 51.6
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.0e-23 115.2 403 37.7
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 7.2e-22 109.0 195 39.5
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 4.7e-21 106.3 280 45.4
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 4.0e-20 103.2 159 45.9
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.7e-18 97.8 182 38.5
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 1.1e-17 95.1 85 63.5
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 5.9e-16 89.4 112 47.3
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 7.7e-16 89.0 100 48.0
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 2.2e-15 87.4 83 61.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 3.2e-14 83.6 92 48.9
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 7.2e-14 82.4 176 34.7
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 1.0e-12 78.6 98 49.0
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 5.2e-12 76.3 79 62.0
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.8e-10 69.7 77 58.4
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 7.0e-09 65.9 97 41.2
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.7e-08 63.9 93 40.9
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 3.5e-08 63.5 93 41.9
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.5e-08 63.2 88 42.0
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-07 62.0 129 35.7
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-07 61.6 120 36.7
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 3.8e-07 60.1 44 63.6
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 5.0e-07 59.7 103 38.8
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-06 58.2 74 47.3


User provided reference genes

Program Settings