Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 6.7e-275 950.3 557 100.0
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 5.8e-85 319.3 369 55.6
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 1.1e-78 298.5 365 52.3
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 5.3e-78 296.2 367 53.7
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 2.0e-77 294.3 385 50.6
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 9.9e-77 292.0 368 52.2
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.3e-76 291.6 394 51.5
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.7e-76 291.2 385 50.9
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 1.9e-75 287.7 366 57.1
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 7.1e-75 285.8 384 52.1
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.2e-74 285.0 372 51.6
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.2e-74 285.0 372 51.1
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 2.3e-65 254.2 370 48.1
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 6.9e-62 242.7 324 50.9
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 9.3e-59 232.3 354 46.6
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 2.3e-49 201.1 343 44.6
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 3.7e-39 167.2 390 37.9
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 4.5e-37 160.2 392 37.8
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 7.7e-37 159.5 385 36.6
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.3e-36 158.7 418 35.9
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 2.2e-36 157.9 398 37.2
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.9e-36 157.5 370 37.8
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 3.8e-36 157.1 401 36.4
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 6.5e-36 156.4 398 36.4
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.4e-35 155.2 394 36.0
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.9e-35 154.8 388 35.8
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.6e-34 151.8 389 37.5
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 3.6e-34 150.6 395 35.2
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.0e-33 149.1 399 34.1
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.0e-33 149.1 389 35.5
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 1.4e-33 148.7 392 34.9
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 1.4e-33 148.7 399 35.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 2.3e-33 147.9 398 37.2
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 6.7e-33 146.4 398 35.7
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.1e-32 145.6 389 35.2
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 1.5e-32 145.2 374 34.5
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 3.3e-32 144.1 379 33.5
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 3.3e-32 144.1 393 35.6
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 4.4e-32 143.7 378 35.2
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 5.7e-32 143.3 399 34.6
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 7.4e-32 142.9 380 33.9
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 9.7e-32 142.5 400 35.5
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 9.7e-32 142.5 380 33.4
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 3.7e-31 140.6 398 34.7
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 4.8e-31 140.2 383 33.9
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 4.8e-31 140.2 381 37.0
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 8.2e-31 139.4 377 36.1
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 8.2e-31 139.4 379 34.8
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.8e-30 138.3 391 34.8
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 3.1e-30 137.5 367 36.8
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 5.3e-30 136.7 390 33.3
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 9.1e-30 136.0 387 34.1
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 1.6e-29 135.2 406 32.3
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 5.9e-29 133.3 422 34.1
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 7.7e-29 132.9 368 33.7
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 1.7e-28 131.7 369 33.1
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 2.9e-28 131.0 367 36.2
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 1.9e-27 128.3 397 33.2
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 2.5e-27 127.9 380 33.2
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 3.2e-27 127.5 477 30.8
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 4.2e-27 127.1 403 31.8
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 4.2e-27 127.1 400 33.5
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 9.4e-27 125.9 383 33.7
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.2e-26 125.6 408 31.9
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 2.7e-26 124.4 366 34.7
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 4.7e-26 123.6 392 32.9
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 4.7e-26 123.6 380 33.9
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 8.0e-26 122.9 383 33.4
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 8.0e-26 122.9 327 35.2
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 4.0e-25 120.6 385 32.2
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 2.0e-24 118.2 368 33.2
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 5.7e-24 116.7 400 30.8
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 8.2e-23 112.8 381 32.5
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 1.6e-21 108.6 374 32.1
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.3e-20 105.5 488 32.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.3e-20 105.5 403 30.0
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.5e-19 102.1 419 37.2
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.5e-19 102.1 405 28.9
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 4.2e-19 100.5 327 32.1
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 1.6e-18 98.6 317 31.2
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 8.0e-18 96.3 365 29.9
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 1.4e-17 95.5 317 31.2
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.4e-17 95.5 360 29.7
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.8e-17 95.1 382 41.4
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 5.2e-17 93.6 416 28.8
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 5.7e-16 90.1 396 30.3
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.7e-15 88.6 363 30.3
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 6.3e-15 86.7 427 28.8
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 6.3e-15 86.7 313 33.5
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 1.4e-14 85.5 432 29.9
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 2.4e-14 84.7 318 28.9
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 6.5e-12 76.6 383 27.9
BcaNung06177 Brassica carinata HOM05D006327 ORTHO05D007952 3.2e-11 74.3 64 60.9
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.2e-11 74.3 364 27.5
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.2e-11 73.9 379 28.0
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 3.6e-10 70.9 57 52.6
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.6e-10 70.9 57 57.9
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 4.7e-10 70.5 367 27.2
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.0e-10 69.7 76 50.0
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 1.0e-09 69.3 128 39.1
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-09 69.3 53 60.4
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-09 69.3 57 56.1
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.4e-09 68.9 76 50.0
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.8e-09 68.6 76 50.0
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 5.2e-09 67.0 197 34.5
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 6.8e-09 66.6 352 25.3
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.5e-08 65.5 57 52.6
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.5e-08 65.5 57 56.1
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.5e-08 65.5 60 50.0
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 2.0e-08 65.1 349 27.5
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 2.6e-08 64.7 66 57.6
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.6e-08 64.7 76 47.4
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.6e-08 64.7 76 47.4
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 5.7e-08 63.5 95 40.0
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 1.4e-06 58.9 95 38.9
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 4.1e-06 57.4 154 40.3
Pp3c2_2380 Physcomitrium patens HOM05D022772 ORTHO05D025825 9.2e-06 56.2 95 34.7


User provided reference genes

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