Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G15260 Aethionema arabicum HOM05D000029 ORTHO05D023372 5.5e-34 149.1 114 100.0
Gohir.A02G079000 Gossypium hirsutum HOM05D000029 ORTHO05D002500 9.7e-15 85.1 110 75.5
Duzib041G0350 Durio zibethinus HOM05D000029 ORTHO05D002500 1.7e-14 84.3 110 74.5
Gohir.D02G086900 Gossypium hirsutum HOM05D000029 ORTHO05D002500 1.7e-14 84.3 110 74.5
Gorai.005G097600 Gossypium raimondii HOM05D000029 ORTHO05D002500 1.7e-14 84.3 110 74.5
Thecc.08G193700 Theobroma cacao HOM05D000029 ORTHO05D002500 3.7e-14 83.2 108 75.0
Phvul.009G114500 Phaseolus vulgaris HOM05D000029 ORTHO05D002500 5.3e-13 79.3 108 74.1
ECA246G2641 Erigeron canadensis HOM05D000029 ORTHO05D002500 1.2e-12 78.2 111 72.1
Gohir.A06G028800 Gossypium hirsutum HOM05D000029 ORTHO05D002500 4.5e-12 76.3 108 72.2
Medtr3g110860 Medicago truncatula HOM05D000029 ORTHO05D002500 4.5e-12 76.3 106 72.6
CSS0017849 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 5.9e-12 75.9 45 80.0
vmacro04617 Vaccinium macrocarpon HOM05D000029 ORTHO05D002500 7.7e-12 75.5 108 71.3
CSS0038857 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 1.3e-11 74.7 46 78.3
CSS0040647 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 1.3e-11 74.7 46 78.3
Gorai.010G030600 Gossypium raimondii HOM05D000029 ORTHO05D002500 1.7e-11 74.3 108 71.3
TAR381G1696 Trochodendron aralioides HOM05D000029 ORTHO05D002500 1.7e-11 74.3 110 69.1
Actinidia29643 Actinidia chinensis HOM05D000029 ORTHO05D002500 2.2e-11 73.9 47 74.5
Aqoxy5G01883_Aqoxy5G01884 Aquilegia oxysepala HOM05D000029 ORTHO05D002500 2.9e-11 73.6 46 76.1
Gohir.D06G027432 Gossypium hirsutum HOM05D000029 ORTHO05D002500 5.0e-11 72.8 108 70.4
Lalb_Chr11g0064731 Lupinus albus HOM05D000029 ORTHO05D002500 8.5e-11 72.0 108 74.1
QL12p040375 Quercus lobata HOM05D000029 ORTHO05D002500 8.5e-11 72.0 45 73.3
Rhsim01G0080400 Rhododendron simsii HOM05D008549 ORTHO05D023372 1.1e-10 71.6 47 72.3
Rhsim07G0215100 Rhododendron simsii HOM05D000029 ORTHO05D002500 1.1e-10 71.6 43 76.7
RhsimUnG0068600 Rhododendron simsii HOM05D000029 ORTHO05D023372 1.1e-10 71.6 47 72.3
CANSAT25G3834 Cannabis sativa HOM05D000029 ORTHO05D002500 3.2e-10 70.1 43 76.7
CSS0010345 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 4.2e-10 69.7 43 76.7
CSS0033403 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D002500 4.2e-10 69.7 43 76.7
Lalb_Chr08g0242781 Lupinus albus HOM05D000029 ORTHO05D002500 4.2e-10 69.7 45 77.8
PGR031G2221 Punica granatum HOM05D000029 ORTHO05D002500 4.2e-10 69.7 46 71.7
RcHm_v2.0_Chr7g0232471 Rosa chinensis HOM05D000029 ORTHO05D002500 5.5e-10 69.3 44 75.0
Duzib116G0435 Durio zibethinus HOM05D000029 ORTHO05D002500 9.4e-10 68.6 44 70.5
Nitab4.5_0006982g0010 Nicotiana tabacum HOM05D000029 ORTHO05D002500 9.4e-10 68.6 45 71.1
Psat5g019120 Pisum sativum HOM05D000029 ORTHO05D002500 9.4e-10 68.6 48 68.8
Actinidia19270 Actinidia chinensis HOM05D000029 ORTHO05D002500 1.2e-09 68.2 108 69.4
MELO3C003487.2 Cucumis melo HOM05D000029 ORTHO05D002500 1.6e-09 67.8 46 67.4
MBI16_g26741_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D005879 1.6e-09 67.8 110 65.5
RcHm_v2.0_Chr7g0217331 Rosa chinensis HOM05D000029 ORTHO05D002500 1.6e-09 67.8 47 70.2
Cfa020703 Carpinus fangiana HOM05D000029 ORTHO05D002500 2.1e-09 67.4 45 68.9
Nitab4.5_0000377g0050 Nicotiana tabacum HOM05D000029 ORTHO05D002500 2.1e-09 67.4 43 72.1
COL.COLO4_17834 Corchorus olitorius HOM05D000029 ORTHO05D002500 2.7e-09 67.0 44 72.7
HPP92_018803 Vanilla planifolia HOM05D000029 ORTHO05D002500 3.6e-09 66.6 49 63.3
Ca_15552_v3 Cicer arietinum L. HOM05D000029 ORTHO05D002500 6.1e-09 65.9 45 71.1
CsaV3_3G048320 Cucumis sativus L. HOM05D000029 ORTHO05D002500 6.1e-09 65.9 42 71.4
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.1e-09 65.9 108 69.4
Gohir.D01G170300 Gossypium hirsutum HOM05D000029 ORTHO05D002500 1.0e-08 65.1 42 76.2
Gorai.002G211900 Gossypium raimondii HOM05D000029 ORTHO05D002500 1.0e-08 65.1 42 76.2
ECA240G0636 Erigeron canadensis HOM05D000029 ORTHO05D002500 1.4e-08 64.7 49 63.3
Eucgr.F02181 Eucalyptus grandis HOM05D000029 ORTHO05D002500 1.4e-08 64.7 44 70.5
Nn1g05940 Nelumbo nucifera HOM05D000029 ORTHO05D002500 1.4e-08 64.7 46 69.6
Nn5g28014 Nelumbo nucifera HOM05D000029 ORTHO05D002500 1.4e-08 64.7 46 69.6
MD08G1210000 Malus domestica HOM05D000029 ORTHO05D002500 1.8e-08 64.3 43 69.8
Cfa020701 Carpinus fangiana HOM05D000029 ORTHO05D002500 3.0e-08 63.5 43 67.4
Gohir.A05G215000 Gossypium hirsutum HOM05D000029 ORTHO05D002500 3.0e-08 63.5 108 64.8
Gohir.D05G218300 Gossypium hirsutum HOM05D000029 ORTHO05D002500 4.0e-08 63.2 108 67.6
Gorai.009G225300 Gossypium raimondii HOM05D000029 ORTHO05D002500 4.0e-08 63.2 108 67.6
Sed0015822 Sechium edule HOM05D000029 ORTHO05D002500 5.2e-08 62.8 110 66.4
A08p34250 Brassica napus HOM05D000029 ORTHO05D002500 6.8e-08 62.4 36 80.6
C08p13330 Brassica napus HOM05D000029 ORTHO05D002500 6.8e-08 62.4 110 68.2
BraA08t35337Z Brassica rapa HOM05D000029 ORTHO05D002500 6.8e-08 62.4 36 80.6
FAN27G1985 Fragaria x ananassa HOM05D000029 ORTHO05D002500 6.8e-08 62.4 110 67.3
MD15G1394100 Malus domestica HOM05D000029 ORTHO05D002500 6.8e-08 62.4 109 67.0
CAN.G1980.2 Capsicum annuum HOM05D000029 ORTHO05D002500 8.8e-08 62.0 42 69.0
Lj4A80T29 Lonicera japonica HOM05D000029 ORTHO05D002500 8.8e-08 62.0 108 63.0
QL12p040471 Quercus lobata HOM05D000029 ORTHO05D002500 8.8e-08 62.0 42 69.0
arahy.Tifrunner.gnm1.ann1.7585ZU Arachis hypogaea HOM05D000029 ORTHO05D002500 1.2e-07 61.6 108 65.7
vmacro21380 Vaccinium macrocarpon HOM05D000029 ORTHO05D002500 1.2e-07 61.6 43 65.1
Thecc.08G079400 Theobroma cacao HOM05D000029 ORTHO05D002500 2.0e-07 60.8 35 74.3
PGR083G1018 Punica granatum HOM05D000029 ORTHO05D002500 2.6e-07 60.5 38 73.7
Rhsim11G0146000 Rhododendron simsii HOM05D000029 ORTHO05D002500 2.6e-07 60.5 38 73.7
THA.LOC104816781 Tarenaya hassleriana HOM05D000029 ORTHO05D002500 2.6e-07 60.5 37 75.7
Aqoxy6G01491 Aquilegia oxysepala HOM05D000029 ORTHO05D002500 3.4e-07 60.1 111 64.0
ClCG11G014890 Citrullus lanatus HOM05D000029 ORTHO05D002500 4.4e-07 59.7 40 70.0
Sc26g0004330 Simmondsia chinensis HOM05D000029 ORTHO05D002500 4.4e-07 59.7 38 73.7
TPR.G12416 Trifolium pratense HOM05D000029 ORTHO05D002500 4.4e-07 59.7 34 79.4
A06p06670 Brassica napus HOM05D000029 ORTHO05D002500 5.7e-07 59.3 117 65.8
Duzib132G1037 Durio zibethinus HOM05D000029 ORTHO05D002500 5.7e-07 59.3 107 68.2
ECA246G5279 Erigeron canadensis HOM05D000053 ORTHO05D000035 9.8e-07 58.5 44 59.1
Atru.chr5.2144 Acer truncatum HOM05D000029 ORTHO05D002500 1.3e-06 58.2 108 63.9
HanXRQChr10g0297621 Helianthus annuus HOM05D000029 ORTHO05D002500 1.3e-06 58.2 45 64.4
QL12p040369 Quercus lobata HOM05D000029 ORTHO05D002500 1.3e-06 58.2 38 68.4
MELO3C018552.2 Cucumis melo HOM05D000029 ORTHO05D002500 1.7e-06 57.8 36 75.0
Prupe.1G542300 Prunus persica HOM05D000029 ORTHO05D002500 1.7e-06 57.8 41 68.3
THA.LOC104823685 Tarenaya hassleriana HOM05D000029 ORTHO05D002500 1.7e-06 57.8 37 73.0
Lsat_1_v5_gn_5_110561 Lactuca sativa HOM05D000029 ORTHO05D002500 2.2e-06 57.4 37 73.0
Duzib248G0329 Durio zibethinus HOM05D000029 ORTHO05D002500 2.8e-06 57.0 34 82.4
QL08p006506 Quercus lobata HOM05D000053 ORTHO05D000035 2.8e-06 57.0 40 65.0
ClCG02G007400 Citrullus lanatus HOM05D000029 ORTHO05D002500 3.7e-06 56.6 36 72.2
DCAR_019335 Daucus carota HOM05D000029 ORTHO05D002500 4.8e-06 56.2 40 65.0
Sp1g08630 Schrenkiella parvula HOM05D000029 ORTHO05D002500 4.8e-06 56.2 37 73.0
TWI56G0321 Tripterygium wilfordii HOM05D000029 ORTHO05D002500 4.8e-06 56.2 36 72.2
Zm00001eb134290 Zea mays HOM05D000029 ORTHO05D002500 4.8e-06 56.2 34 76.5
arahy.Tifrunner.gnm1.ann1.9ZS0CG Arachis hypogaea HOM05D000029 ORTHO05D002500 6.3e-06 55.8 108 62.0
PGR042G1539 Punica granatum HOM05D000029 ORTHO05D002500 6.3e-06 55.8 38 65.8
VMungo0540G0509 Vigna mungo HOM05D000029 ORTHO05D002500 6.3e-06 55.8 106 62.3


User provided reference genes

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