Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 9.1e-56 219.9 106 100.0
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 2.3e-27 125.6 75 70.7
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 4.0e-27 124.8 72 72.2
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 2.0e-26 122.5 73 69.9
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 7.5e-26 120.6 88 60.2
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 7.5e-26 120.6 88 60.2
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 3.7e-25 118.2 74 68.9
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.7e-25 118.2 74 67.6
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.9e-25 117.9 73 68.5
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 5.4e-24 114.4 92 56.5
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 5.4e-24 114.4 88 56.8
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 5.4e-24 114.4 88 56.8
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 1.6e-23 112.8 73 63.0
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 2.3e-22 109.0 88 53.4
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.9e-22 108.2 73 64.4
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 5.0e-22 107.8 72 56.9
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 8.6e-22 107.1 72 62.5
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 8.6e-22 107.1 72 62.5
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.1e-21 106.7 88 52.3
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 1.1e-21 106.7 88 54.5
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 1.9e-21 105.9 72 61.1
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 1.9e-21 105.9 72 61.1
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 2.5e-21 105.5 73 58.9
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 3.3e-21 105.1 72 61.1
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 3.3e-21 105.1 72 61.1
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 4.3e-21 104.8 72 61.1
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 4.3e-21 104.8 73 58.9
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 5.6e-21 104.4 72 61.1
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 5.6e-21 104.4 72 61.1
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 1.2e-20 103.2 73 58.9
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 1.6e-20 102.8 73 56.2
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 4.7e-20 101.3 71 59.2
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 1.8e-19 99.4 81 46.9
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 3.1e-19 98.6 73 54.8
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 3.1e-19 98.6 73 54.8
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 3.1e-19 98.6 81 45.7
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 3.4e-18 95.1 73 54.8
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 4.4e-18 94.7 72 55.6
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 7.5e-18 94.0 79 51.9
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.7e-17 92.8 78 44.9
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 2.9e-17 92.0 79 46.8
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.7e-17 91.7 74 56.8
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 4.9e-17 91.3 79 46.8
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.4e-17 90.9 89 46.1
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 8.3e-17 90.5 81 48.1
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.5e-13 79.7 64 53.1
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.3e-13 78.6 59 52.5
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 3.3e-13 78.6 77 41.6
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 5.6e-13 77.8 73 49.3
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 9.5e-13 77.0 100 40.0
Carub.0005s1184 Capsella rubella HOM05D008416 ORTHO05D010671 1.6e-12 76.3 73 49.3
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 6.2e-12 74.3 60 51.7
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 2.3e-11 72.4 71 40.8
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.9e-08 62.8 71 38.0
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.9e-08 62.8 71 38.0
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 9.2e-08 60.5 80 41.2
Thhalv10015392m.g Eutrema salsugineum HOM05D009469 ORTHO05D011620 7.8e-07 57.4 80 38.8
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 3.0e-06 55.5 74 39.2
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 8.6e-06 53.9 65 43.1
AT5G14995 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 8.6e-06 53.9 65 38.5


User provided reference genes

Program Settings