Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 5.9e-68 260.8 135 100.0
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 4.3e-58 228.0 135 87.4
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 4.7e-57 224.6 136 87.5
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 1.8e-56 222.6 136 86.8
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 1.8e-56 222.6 136 86.8
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 1.8e-56 222.6 136 86.8
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 2.3e-56 222.2 136 86.0
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 1.5e-55 219.5 135 83.7
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 2.0e-55 219.2 136 85.3
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 2.0e-55 219.2 136 85.3
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 4.4e-55 218.0 136 84.6
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 3.2e-53 211.8 135 83.7
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 9.2e-53 210.3 135 82.2
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 2.7e-52 208.8 135 83.0
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 7.8e-52 207.2 128 84.4
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 7.8e-52 207.2 128 84.4
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 8.6e-51 203.8 120 83.3
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 1.5e-50 203.0 128 82.8
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 5.6e-50 201.1 120 80.0
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 5.6e-50 201.1 120 82.5
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 1.6e-49 199.5 120 81.7
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 2.1e-49 199.1 120 80.0
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 2.8e-49 198.7 120 80.0
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 2.8e-49 198.7 120 80.0
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 3.6e-49 198.4 119 81.5
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 3.6e-49 198.4 120 79.2
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 3.6e-49 198.4 120 79.2
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 6.2e-49 197.6 120 79.2
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 1.1e-48 196.8 120 79.2
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 1.1e-48 196.8 120 78.3
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 1.1e-48 196.8 125 76.0
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 1.4e-48 196.4 120 79.2
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 1.4e-48 196.4 121 77.7
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 1.4e-48 196.4 120 78.3
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 3.1e-48 195.3 120 80.0
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 4.0e-48 194.9 120 77.5
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 5.2e-48 194.5 118 78.8
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 5.2e-48 194.5 120 78.3
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 5.2e-48 194.5 122 78.7
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 5.2e-48 194.5 120 77.5
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 6.8e-48 194.1 122 78.7
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 8.9e-48 193.7 120 76.7
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 8.9e-48 193.7 120 78.3
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 8.9e-48 193.7 120 78.3
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 1.2e-47 193.4 133 71.4
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 1.2e-47 193.4 122 77.0
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 1.2e-47 193.4 122 78.7
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 1.2e-47 193.4 122 74.6
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 1.5e-47 193.0 122 77.0
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 2.0e-47 192.6 128 71.1
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 2.0e-47 192.6 120 76.7
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.0e-47 192.6 120 76.7
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 2.0e-47 192.6 118 78.0
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 3.4e-47 191.8 120 75.8
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 3.4e-47 191.8 120 75.8
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 4.4e-47 191.4 120 75.8
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 7.5e-47 190.7 120 75.8
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 7.5e-47 190.7 119 78.2
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.3e-46 189.9 125 72.8
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.7e-46 189.5 120 75.8
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 2.2e-46 189.1 117 78.6
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 2.2e-46 189.1 120 75.8
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.9e-46 188.7 120 75.0
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 4.9e-46 188.0 120 75.8
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 6.4e-46 187.6 129 73.6
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 6.4e-46 187.6 120 73.3
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 8.3e-46 187.2 129 72.9
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 1.1e-45 186.8 119 74.8
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 1.1e-45 186.8 120 75.0
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 1.1e-45 186.8 118 76.3
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.1e-45 186.8 120 75.0
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 1.4e-45 186.4 118 79.7
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 1.4e-45 186.4 126 71.4
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 1.9e-45 186.0 129 72.9
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 5.4e-45 184.5 127 70.9
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 5.4e-45 184.5 120 74.2
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 7.1e-45 184.1 123 74.0
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 7.1e-45 184.1 119 74.8
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 9.2e-45 183.7 119 75.6
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 1.2e-44 183.3 120 73.3
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 1.6e-44 183.0 139 67.6
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 1.6e-44 183.0 120 74.2
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 2.1e-44 182.6 120 75.8
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 2.7e-44 182.2 119 76.5
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 3.5e-44 181.8 123 74.0
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 4.6e-44 181.4 134 70.9
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 4.6e-44 181.4 126 71.4
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 6.0e-44 181.0 118 72.9
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 1.3e-43 179.9 129 71.3
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 1.7e-43 179.5 110 76.4
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 5.1e-43 177.9 129 69.8
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 1.1e-42 176.8 110 79.1
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 1.1e-42 176.8 117 71.8
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 1.5e-42 176.4 117 70.9
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 3.3e-42 175.3 105 79.0
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 3.3e-42 175.3 120 69.2
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 4.3e-42 174.9 131 76.3
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 9.5e-42 173.7 117 71.8
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 1.2e-41 173.3 122 73.8
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 6.2e-41 171.0 122 68.9
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 5.2e-40 167.9 108 75.0
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 6.8e-40 167.5 122 66.4
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 4.4e-39 164.9 118 70.3
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 7.6e-39 164.1 126 68.3
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 9.9e-39 163.7 125 68.0
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 1.3e-38 163.3 98 85.7
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 1.3e-38 163.3 98 85.7
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.3e-38 163.3 99 82.8
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 1.7e-38 162.9 120 65.8
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 2.9e-38 162.2 98 83.7
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 3.8e-38 161.8 122 62.3
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 4.9e-38 161.4 119 68.1
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 8.4e-38 160.6 104 72.1
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 1.9e-37 159.5 98 78.6
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 3.2e-37 158.7 119 67.2
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 7.1e-37 157.5 98 77.6
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 1.6e-36 156.4 120 66.7
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 6.0e-36 154.5 102 74.5
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 5.1e-35 151.4 123 64.2
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.5e-34 149.8 90 76.7
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 1.9e-34 149.4 120 62.5
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 2.5e-34 149.1 108 67.6
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 4.7e-33 144.8 95 74.7
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 5.2e-32 141.4 119 61.3
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 6.9e-32 141.0 120 60.8
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.2e-31 140.2 109 62.4
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 2.0e-31 139.4 97 71.1
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 4.9e-30 134.8 86 74.4
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 2.4e-29 132.5 79 79.7
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 2.4e-29 132.5 83 75.9
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 5.4e-29 131.3 80 76.2
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 7.1e-29 131.0 102 68.6
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 4.6e-28 128.3 107 58.9
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 6.0e-28 127.9 116 59.5
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 1.0e-27 127.1 120 55.8
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 1.3e-27 126.7 113 55.8
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 2.3e-27 125.9 120 50.8
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 1.1e-26 123.6 113 54.9
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 1.5e-26 123.2 124 54.8
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 1.9e-26 122.9 85 72.9
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 2.1e-25 119.4 118 54.2
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 8.1e-25 117.5 88 61.4
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 4.0e-24 115.2 115 53.9
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 6.9e-24 114.4 118 49.2
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 1.5e-23 113.2 126 51.6
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 2.0e-23 112.8 121 48.8
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 7.6e-23 110.9 129 48.1
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 7.6e-23 110.9 114 48.2
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 3.8e-22 108.6 118 50.0
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 6.4e-22 107.8 117 46.2
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 3.2e-21 105.5 108 51.9
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 3.0e-19 99.0 76 71.1
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 6.7e-19 97.8 61 77.0
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 2.8e-17 92.4 56 73.2
AUR62042505 Chenopodium quinoa HOM05D004760 ORTHO05D138125 1.1e-10 70.5 77 50.6
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 1.4e-08 63.5 35 85.7
Lalb_Chr02g0155971 Lupinus albus HOM05D004760 ORTHO05D006114 4.5e-07 58.5 63 44.4
TPR.G4101 Trifolium pratense HOM05D004009 ORTHO05D004617 5.8e-07 58.2 111 38.7
Hma1.2p1_0472F.1_g159660 Hydrangea macrophylla HOM05D004009 ORTHO05D004617 1.0e-06 57.4 111 35.1
VMungo0647G1943 Vigna mungo HOM05D004009 ORTHO05D004617 1.0e-06 57.4 111 40.5
arahy.Tifrunner.gnm1.ann1.Q786Q7 Arachis hypogaea HOM05D004009 ORTHO05D004617 1.3e-06 57.0 111 40.5
arahy.Tifrunner.gnm1.ann1.WBP6JB Arachis hypogaea HOM05D004009 ORTHO05D004617 1.3e-06 57.0 111 40.5
Phvul.008G286800 Phaseolus vulgaris HOM05D004009 ORTHO05D004617 1.3e-06 57.0 111 39.6
TPR.G6029 Trifolium pratense HOM05D004009 ORTHO05D004617 1.3e-06 57.0 111 39.6
Lalb_Chr18g0045811 Lupinus albus HOM05D004009 ORTHO05D004617 1.7e-06 56.6 111 36.9
Glyma.02G307100 Glycine max HOM05D004009 ORTHO05D004617 2.2e-06 56.2 111 38.7
Lj2g0025881 Lotus japonicus HOM05D004009 ORTHO05D004617 2.2e-06 56.2 111 37.8
Sed0024624 Sechium edule HOM05D004009 ORTHO05D004617 2.2e-06 56.2 111 34.2
Glyma.14G006000 Glycine max HOM05D004009 ORTHO05D004617 2.9e-06 55.8 111 36.9
Psat6g233080 Pisum sativum HOM05D004009 ORTHO05D004617 2.9e-06 55.8 111 38.7
Medtr1g114200 Medicago truncatula HOM05D004009 ORTHO05D004617 3.8e-06 55.5 111 38.7
AagrBONN_evm.TU.Sc2ySwM_368.1872 Anthoceros agrestis HOM05D004009 ORTHO05D004617 4.9e-06 55.1 113 40.7


User provided reference genes

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