Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 3.4e-74 281.6 143 100.0
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 4.2e-72 274.6 143 96.5
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 5.5e-72 274.2 143 96.5
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 7.2e-72 273.9 143 95.8
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 7.2e-72 273.9 143 95.8
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 7.2e-72 273.9 143 95.8
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 7.2e-72 273.9 143 95.8
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 7.2e-72 273.9 143 95.8
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.2e-71 273.1 143 95.8
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 1.6e-71 272.7 143 95.1
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 1.6e-71 272.7 143 95.1
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 2.1e-71 272.3 143 95.8
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 2.7e-71 271.9 143 95.1
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 4.6e-71 271.2 143 94.4
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 4.6e-71 271.2 143 94.4
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 4.6e-71 271.2 143 94.4
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 4.6e-71 271.2 143 95.1
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.7e-65 252.7 143 90.9
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 3.8e-65 251.5 136 93.4
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 5.0e-65 251.1 143 86.7
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 6.5e-65 250.8 143 87.4
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 1.4e-64 249.6 143 86.0
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 1.9e-64 249.2 143 86.0
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 1.9e-64 249.2 143 84.6
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 4.2e-64 248.1 143 86.0
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 4.2e-64 248.1 143 85.3
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 5.5e-64 247.7 143 84.6
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 5.5e-64 247.7 143 85.3
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 7.2e-64 247.3 143 83.9
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 9.4e-64 246.9 143 85.3
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 9.4e-64 246.9 143 85.3
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 9.4e-64 246.9 143 83.9
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 9.4e-64 246.9 143 83.9
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 1.2e-63 246.5 143 83.2
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 1.6e-63 246.1 143 83.2
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 1.6e-63 246.1 143 83.9
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.1e-63 245.7 143 85.3
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 2.1e-63 245.7 143 83.9
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 2.1e-63 245.7 143 84.6
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 2.1e-63 245.7 143 84.6
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 2.1e-63 245.7 143 84.6
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 84.6
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 84.6
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 83.9
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 84.6
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 84.6
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 2.7e-63 245.4 143 84.6
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 2.7e-63 245.4 142 84.5
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 4.7e-63 244.6 143 84.6
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 4.7e-63 244.6 143 83.2
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 6.1e-63 244.2 143 83.9
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 6.1e-63 244.2 143 81.8
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 8.0e-63 243.8 143 83.2
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 8.0e-63 243.8 143 84.6
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 8.0e-63 243.8 147 86.4
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 1.0e-62 243.4 143 83.2
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 1.0e-62 243.4 143 83.9
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 1.0e-62 243.4 143 81.8
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.4e-62 243.0 143 86.0
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 1.4e-62 243.0 143 86.0
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 1.4e-62 243.0 143 83.2
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 1.4e-62 243.0 143 83.2
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.8e-62 242.7 143 83.9
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.8e-62 242.7 143 83.9
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 1.8e-62 242.7 143 83.2
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 2.3e-62 242.3 143 86.0
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 3.0e-62 241.9 143 83.9
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 3.0e-62 241.9 143 82.5
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 3.9e-62 241.5 143 85.3
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 5.2e-62 241.1 143 81.1
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 5.2e-62 241.1 143 81.1
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 5.2e-62 241.1 143 85.3
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 6.7e-62 240.7 143 82.5
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 6.7e-62 240.7 143 84.6
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 8.8e-62 240.4 143 83.9
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 8.8e-62 240.4 143 83.2
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 8.8e-62 240.4 143 81.1
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 1.1e-61 240.0 143 82.5
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.5e-61 239.6 143 81.1
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 2.0e-61 239.2 143 82.5
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.0e-61 239.2 143 82.5
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 2.0e-61 239.2 143 83.9
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 3.3e-61 238.4 143 81.8
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 4.4e-61 238.0 143 80.4
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 4.4e-61 238.0 143 80.4
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.4e-61 238.0 143 82.5
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 4.4e-61 238.0 143 81.8
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 7.4e-61 237.3 143 81.1
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 9.7e-61 236.9 143 81.8
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 9.7e-61 236.9 143 81.8
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 1.7e-60 236.1 143 81.1
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 1.7e-60 236.1 143 81.1
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 1.7e-60 236.1 143 81.1
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 2.2e-60 235.7 143 79.0
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 4.8e-60 234.6 143 83.2
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 4.8e-60 234.6 143 80.4
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 6.3e-60 234.2 143 78.3
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 1.1e-59 233.4 143 77.6
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 1.1e-59 233.4 143 78.3
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 1.1e-59 233.4 143 80.4
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 1.4e-59 233.0 172 71.5
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 2.6e-58 228.8 134 82.8
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.2e-57 225.7 143 80.4
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 3.8e-57 224.9 143 76.2
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 5.0e-57 224.6 134 80.6
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 1.1e-56 223.4 162 73.5
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.5e-56 222.2 138 79.7
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 3.2e-56 221.9 143 74.8
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.2e-56 221.5 143 78.3
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 8.0e-55 217.2 134 82.8
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 7.5e-53 210.7 133 77.4
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 9.7e-53 210.3 143 75.5
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 2.2e-52 209.1 209 56.5
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 8.2e-52 207.2 132 79.5
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.8e-51 206.1 197 57.9
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.3e-51 204.5 128 81.2
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 1.8e-46 189.5 105 88.6
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 2.6e-45 185.7 105 85.7
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 9.8e-45 183.7 105 85.7
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 8.3e-44 180.6 104 82.7
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.8e-43 179.5 97 89.7
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 1.5e-40 169.9 144 63.9
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 4.2e-40 168.3 84 97.6
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 8.0e-39 164.1 144 59.7
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 7.5e-37 157.5 80 91.2
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 3.8e-33 145.2 142 57.7
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 1.5e-32 143.3 144 52.1
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.4e-30 136.7 88 76.1
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-27 127.1 92 68.5
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 1.2e-21 107.1 62 83.9
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 3.4e-21 105.5 58 86.2
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 4.9e-20 101.7 132 46.2
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 1.1e-19 100.5 54 83.3
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 6.6e-17 91.3 149 40.9
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 1.1e-14 84.0 45 86.7
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.3e-14 82.8 52 75.0
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 1.3e-12 77.0 197 31.5
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 9.2e-11 70.9 89 44.9
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 3.0e-09 65.9 122 30.3


User provided reference genes

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