Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 3.8e-67 258.1 132 100.0
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 5.1e-56 221.1 114 97.4
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 8.2e-38 160.6 115 76.5
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 7.2e-34 147.5 115 72.2
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 8.7e-32 140.6 114 69.3
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 8.7e-32 140.6 114 69.3
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 8.7e-32 140.6 114 69.3
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 9.7e-31 137.1 116 68.1
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.3e-30 136.7 113 68.1
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 8.2e-30 134.0 113 67.3
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 9.1e-29 130.6 74 85.1
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 7.7e-28 127.5 118 65.3
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 1.7e-27 126.3 117 68.4
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 9.1e-21 104.0 117 58.1
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 3.0e-16 89.0 118 49.2
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 2.0e-15 86.3 118 52.5
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 3.3e-15 85.5 114 50.0
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 4.4e-15 85.1 85 57.6
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 7.4e-15 84.3 118 51.7
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 7.4e-15 84.3 118 51.7
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 9.7e-15 84.0 117 51.3
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 9.7e-15 84.0 106 50.9
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.7e-14 83.2 126 46.0
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 2.2e-14 82.8 112 51.8
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 3.7e-14 82.0 66 62.1
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 4.8e-14 81.6 51 70.6
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 6.3e-14 81.3 112 45.5
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 1.4e-13 80.1 126 46.0
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 1.8e-13 79.7 66 59.1
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 1.8e-13 79.7 111 48.6
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 1.8e-13 79.7 119 46.2
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 2.4e-13 79.3 58 67.2
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 2.4e-13 79.3 62 64.5
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.4e-13 79.3 58 65.5
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 2.4e-13 79.3 62 59.7
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 3.1e-13 79.0 123 43.9
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.1e-13 79.0 58 63.8
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 3.1e-13 79.0 115 49.6
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 4.1e-13 78.6 58 63.8
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 4.1e-13 78.6 58 63.8
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 4.1e-13 78.6 111 45.9
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 5.3e-13 78.2 58 67.2
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 9.1e-13 77.4 114 41.2
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 9.1e-13 77.4 58 63.8
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 1.2e-12 77.0 105 44.8
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 1.6e-12 76.6 59 62.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 2.0e-12 76.3 116 41.4
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 2.0e-12 76.3 122 44.3
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 2.6e-12 75.9 114 49.1
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 3.5e-12 75.5 58 65.5
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 4.5e-12 75.1 77 55.8
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 4.5e-12 75.1 120 45.0
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 4.5e-12 75.1 96 49.0
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 4.5e-12 75.1 119 45.4
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 5.9e-12 74.7 106 45.3
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 5.9e-12 74.7 90 47.8
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 7.7e-12 74.3 56 62.5
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-11 73.9 116 45.7
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.0e-11 73.9 116 45.7
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 1.0e-11 73.9 88 51.1
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 1.3e-11 73.6 117 47.0
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 1.3e-11 73.6 53 66.0
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 1.3e-11 73.6 85 51.8
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.7e-11 73.2 67 53.7
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 2.2e-11 72.8 111 40.5
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 5.0e-11 71.6 116 43.1
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 6.5e-11 71.2 38 81.6
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 6.5e-11 71.2 73 52.1
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 6.5e-11 71.2 126 44.4
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 8.5e-11 70.9 56 62.5
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 1.1e-10 70.5 57 61.4
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 1.1e-10 70.5 131 40.5
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 1.1e-10 70.5 131 40.5
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 1.5e-10 70.1 55 61.8
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 1.5e-10 70.1 54 63.0
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.5e-10 69.3 37 81.1
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 2.5e-10 69.3 113 44.2
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 3.2e-10 68.9 38 78.9
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 4.2e-10 68.6 110 45.5
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 4.2e-10 68.6 111 46.8
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 5.5e-10 68.2 108 42.6
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 7.2e-10 67.8 55 61.8
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.6e-09 66.6 123 43.1
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 2.7e-09 65.9 121 40.5
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 4.7e-09 65.1 38 71.1
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 6.1e-09 64.7 50 62.0
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 2.3e-08 62.8 37 70.3
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 5.2e-08 61.6 38 63.2
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 6.7e-08 61.2 37 78.4
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 3.7e-06 55.5 107 38.3


User provided reference genes

Program Settings