Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G12340 Aethionema arabicum HOM05D006553 ORTHO05D008070 2.7e-32 141.4 69 100.0
Aa31LG3G2660 Aethionema arabicum HOM05D006553 ORTHO05D008070 6.0e-16 87.0 64 71.9
Thhalv10021175m.g Eutrema salsugineum HOM05D006553 ORTHO05D008070 2.3e-15 85.1 64 68.8
AL3G21450 Arabidopsis lyrata HOM05D006553 ORTHO05D008070 5.1e-15 84.0 64 67.2
Carub.0008s0494 Capsella rubella HOM05D006553 ORTHO05D008070 6.6e-15 83.6 64 68.8
Sp3g08410 Schrenkiella parvula HOM05D006553 ORTHO05D008070 8.7e-15 83.2 64 68.8
THA.LOC104816396 Tarenaya hassleriana HOM05D006553 ORTHO05D008070 1.9e-14 82.0 64 67.2
BcaNung06241 Brassica carinata HOM05D006553 ORTHO05D008070 5.6e-14 80.5 64 65.6
A05p38960 Brassica napus HOM05D006553 ORTHO05D008070 5.6e-14 80.5 64 65.6
C05p57990 Brassica napus HOM05D006553 ORTHO05D008070 5.6e-14 80.5 64 65.6
BolC5t34455H Brassica oleracea HOM05D006553 ORTHO05D008070 5.6e-14 80.5 64 65.6
BraA05t22687Z Brassica rapa HOM05D006553 ORTHO05D008070 5.6e-14 80.5 64 65.6
Glyma.03G196100 Glycine max HOM05D006553 ORTHO05D008070 9.6e-14 79.7 64 65.6
Phvul.001G190400 Phaseolus vulgaris HOM05D006553 ORTHO05D008070 9.6e-14 79.7 64 64.1
Cpa.g.sc5.16 Carica papaya HOM05D006553 ORTHO05D008070 1.3e-13 79.3 64 64.1
Haze_19616 Corylus avellana HOM05D006553 ORTHO05D008070 1.6e-13 79.0 68 60.3
Hund19930 Selenicereus undatus HOM05D006553 ORTHO05D008070 1.6e-13 79.0 64 62.5
VMungo1383G0588 Vigna mungo HOM05D006553 ORTHO05D008070 1.6e-13 79.0 64 65.6
MD12G1036600 Malus domestica HOM05D006553 ORTHO05D008070 2.1e-13 78.6 64 62.5
FvH4_6g18800 Fragaria vesca HOM05D006553 ORTHO05D008070 2.8e-13 78.2 64 62.5
FAN02G1927 Fragaria x ananassa HOM05D006553 ORTHO05D008070 2.8e-13 78.2 64 62.5
Prupe.7G109600 Prunus persica HOM05D006553 ORTHO05D008070 2.8e-13 78.2 64 64.1
EL10Ac7g16914 Beta vulgaris HOM05D006553 ORTHO05D008070 3.6e-13 77.8 64 60.9
AUR62028519 Chenopodium quinoa HOM05D006553 ORTHO05D008070 3.6e-13 77.8 64 59.4
MELO3C009475.2 Cucumis melo HOM05D006553 ORTHO05D008070 3.6e-13 77.8 68 58.8
CsaV3_3G037300 Cucumis sativus L. HOM05D006553 ORTHO05D008070 3.6e-13 77.8 68 58.8
Glyma.19G194936 Glycine max HOM05D006553 ORTHO05D008070 3.6e-13 77.8 64 64.1
RcHm_v2.0_Chr3g0473811 Rosa chinensis HOM05D006553 ORTHO05D008070 3.6e-13 77.8 64 62.5
TWI77G0984 Tripterygium wilfordii HOM05D006553 ORTHO05D008070 3.6e-13 77.8 64 60.9
AT3G10130 Arabidopsis thaliana HOM05D006553 ORTHO05D008070 4.8e-13 77.4 64 64.1
CSS0014047 Camellia sinensis var. sinensis HOM05D006553 ORTHO05D008070 4.8e-13 77.4 64 62.5
Sed0026247 Sechium edule HOM05D006553 ORTHO05D008070 4.8e-13 77.4 64 60.9
FAN05G5513 Fragaria x ananassa HOM05D006553 ORTHO05D008070 6.2e-13 77.0 64 62.5
Gohir.A04G062500 Gossypium hirsutum HOM05D006553 ORTHO05D008070 6.2e-13 77.0 64 60.9
PGR004G2635 Punica granatum HOM05D006553 ORTHO05D008070 6.2e-13 77.0 64 60.9
TAR636G1909 Trochodendron aralioides HOM05D006553 ORTHO05D008070 6.2e-13 77.0 64 62.5
GSVIVG01033848001 Vitis vinifera HOM05D006553 ORTHO05D008070 6.2e-13 77.0 64 60.9
CARHR084610 Cardamine hirsuta HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 60.9
Cfa016612 Carpinus fangiana HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 60.9
Eucgr.A02662 Eucalyptus grandis HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 60.9
Gohir.D04G099500 Gossypium hirsutum HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 60.9
Gorai.009G402400 Gossypium raimondii HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 60.9
Lj1g0017162 Lotus japonicus HOM05D006553 ORTHO05D008070 8.1e-13 76.6 64 62.5
Ca_09008_v3 Cicer arietinum L. HOM05D006553 ORTHO05D008070 1.1e-12 76.3 64 62.5
Manes.08G025600 Manihot esculenta HOM05D006553 ORTHO05D008070 1.1e-12 76.3 64 60.9
QL07p038710 Quercus lobata HOM05D006553 ORTHO05D008070 1.1e-12 76.3 64 64.1
QL07p038960 Quercus lobata HOM05D006553 ORTHO05D008070 1.1e-12 76.3 64 64.1
CANSAT64G1380 Cannabis sativa HOM05D006553 ORTHO05D008070 1.4e-12 75.9 64 62.5
MBI17_g08341_MAGBIO Magnolia biondii HOM05D006553 ORTHO05D008070 1.4e-12 75.9 68 57.4
Actinidia31271 Actinidia chinensis HOM05D006553 ORTHO05D008070 1.8e-12 75.5 64 60.9
arahy.Tifrunner.gnm1.ann1.J3GQ4Y Arachis hypogaea HOM05D006553 ORTHO05D008070 1.8e-12 75.5 64 60.9
Ciclev10012335m.g Citrus clementina HOM05D006553 ORTHO05D008070 1.8e-12 75.5 64 62.5
COL.COLO4_29728 Corchorus olitorius HOM05D006553 ORTHO05D008070 1.8e-12 75.5 64 60.9
CDE07G1033 Ceratophyllum demersum HOM05D006553 ORTHO05D008070 2.4e-12 75.1 64 59.4
Thecc.05G089700 Theobroma cacao HOM05D006553 ORTHO05D008070 2.4e-12 75.1 64 60.9
CiPaw.09G014600 Carya illinoinensis HOM05D006553 ORTHO05D008070 3.1e-12 74.7 64 60.9
unitig_8.g4964 Utricularia gibba HOM05D006553 ORTHO05D008070 3.1e-12 74.7 64 62.5
ATR0776G018 Amborella trichopoda HOM05D006553 ORTHO05D008070 4.0e-12 74.3 64 59.4
ClCG10G018950 Citrullus lanatus HOM05D006553 ORTHO05D008070 4.0e-12 74.3 64 60.9
Migut.L01780 Erythranthe guttata HOM05D006553 ORTHO05D008070 4.0e-12 74.3 64 60.9
Medtr7g104650 Medicago truncatula HOM05D006553 ORTHO05D008070 4.0e-12 74.3 64 59.4
Nn2g14162 Nelumbo nucifera HOM05D006553 ORTHO05D008070 4.0e-12 74.3 64 59.4
Cc06_g05810 Coffea canephora HOM05D006553 ORTHO05D008070 5.3e-12 73.9 64 59.4
Rhsim04G0131900 Rhododendron simsii HOM05D006553 ORTHO05D008070 5.3e-12 73.9 64 60.9
Peaxi162Scf00096g00313 Petunia axillaris HOM05D006553 ORTHO05D008070 6.9e-12 73.6 64 60.9
SalBow5G0069 Salvia bowleyana HOM05D006553 ORTHO05D008070 6.9e-12 73.6 64 59.4
Hma1.2p1_0232F.1_g097960 Hydrangea macrophylla HOM05D006553 ORTHO05D008070 9.0e-12 73.2 64 60.9
Hma1.2p1_0232F.1_g097970 Hydrangea macrophylla HOM05D006553 ORTHO05D008070 9.0e-12 73.2 64 60.9
HPP92_006351 Vanilla planifolia HOM05D006553 ORTHO05D008070 9.0e-12 73.2 68 54.4
HanXRQChr05g0133131 Helianthus annuus HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 59.4
Lsat_1_v5_gn_8_77160 Lactuca sativa HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 59.4
Lalb_Chr01g0018141 Lupinus albus HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 56.2
Sc20g0006300 Simmondsia chinensis HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 57.8
SGA_v2.0_scaffold35G14069 Striga asiatica HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 60.9
Zm00001eb242810 Zea mays HOM05D006553 ORTHO05D008070 1.5e-11 72.4 64 60.9
Lj3A997G43 Lonicera japonica HOM05D006553 ORTHO05D008070 2.0e-11 72.0 63 55.6
Zm00001eb049670 Zea mays HOM05D006553 ORTHO05D008070 2.0e-11 72.0 64 60.9
Atru.chr8.1531 Acer truncatum HOM05D006553 ORTHO05D008070 2.6e-11 71.6 64 57.8
arahy.Tifrunner.gnm1.ann1.8A6FDN Arachis hypogaea HOM05D006553 ORTHO05D008070 2.6e-11 71.6 64 59.4
CAN.G1069.17 Capsicum annuum HOM05D006553 ORTHO05D008070 2.6e-11 71.6 64 59.4
TPR.G19533 Trifolium pratense HOM05D006553 ORTHO05D008070 2.6e-11 71.6 64 56.2
Os02g0533200 Oryza sativa ssp. japonica HOM05D006553 ORTHO05D008070 3.4e-11 71.2 64 59.4
Solyc10g083350.2 Solanum lycopersicum HOM05D006553 ORTHO05D008070 3.4e-11 71.2 64 59.4
Sopen10g032850 Solanum pennellii HOM05D006553 ORTHO05D008070 3.4e-11 71.2 64 59.4
Potri.016G098500 Populus trichocarpa HOM05D006553 ORTHO05D008070 4.5e-11 70.9 64 56.2
MSTRG.10367 Avicennia marina HOM05D006553 ORTHO05D008070 5.8e-11 70.5 64 59.4
vmacro08867 Vaccinium macrocarpon HOM05D006553 ORTHO05D008070 9.9e-11 69.7 64 56.2
PGSC0003DMG400028255 Solanum tuberosum HOM05D006553 ORTHO05D008070 1.7e-10 68.9 64 57.8
ECA236G1922 Erigeron canadensis HOM05D006553 ORTHO05D008070 2.9e-10 68.2 64 54.7
PSO339G0456 Papaver somniferum HOM05D006553 ORTHO05D008070 2.9e-10 68.2 64 56.2
PSO384G2101 Papaver somniferum HOM05D006553 ORTHO05D008070 3.8e-10 67.8 64 54.7
Zm00001eb215700 Zea mays HOM05D006553 ORTHO05D008070 3.8e-10 67.8 62 56.5
Sabra16G0099500 Salix brachista HOM05D006553 ORTHO05D008070 4.9e-10 67.4 64 53.1
Aqoxy2G01179 Aquilegia oxysepala HOM05D006553 ORTHO05D008070 1.1e-09 66.2 64 53.1
Nitab4.5_0009023g0010 Nicotiana tabacum HOM05D006553 ORTHO05D008070 1.1e-09 66.2 62 56.5
SEGI_29247 Sequoiadendron giganteum HOM05D006553 ORTHO05D008070 1.2e-08 62.8 68 47.1
SEGI_38541 Sequoiadendron giganteum HOM05D006553 ORTHO05D008070 1.2e-08 62.8 68 47.1
AagrBONN_evm.TU.Sc2ySwM_117.1600 Anthoceros agrestis HOM05D006553 ORTHO05D008070 1.0e-07 59.7 64 48.4
Mapoly0131s0003 Marchantia polymorpha HOM05D006553 ORTHO05D008070 1.8e-07 58.9 64 48.4
Pp3c23_15420 Physcomitrium patens HOM05D006553 ORTHO05D008070 9.6e-06 53.1 68 41.2


User provided reference genes

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