Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11900 Aethionema arabicum HOM05D013984 ORTHO05D010089 8.1e-32 139.8 72 100.0
Sp5g23270 Schrenkiella parvula HOM05D013984 ORTHO05D017400 2.7e-11 71.6 56 73.2
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.8e-10 68.9 54 70.4
THA.LOC104809237 Tarenaya hassleriana HOM05D013984 ORTHO05D010089 4.3e-09 64.3 72 50.0
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 9.7e-09 63.2 55 61.8
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 1.3e-08 62.8 65 58.5
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.3e-08 60.5 69 50.7
Carub.0002s1473 Capsella rubella HOM05D013984 ORTHO05D017400 1.4e-07 59.3 60 61.7
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-07 59.3 70 51.4
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 1.8e-07 58.9 73 49.3
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.8e-07 58.9 69 49.3
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 1.8e-07 58.9 53 64.2
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 4.1e-07 57.8 55 61.8
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 4.1e-07 57.8 68 45.6
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 5.3e-07 57.4 53 62.3
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.9e-07 57.0 69 49.3
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 9.1e-07 56.6 55 54.5
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 9.1e-07 56.6 55 54.5
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.5e-06 55.8 68 51.5
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 2.0e-06 55.5 64 50.0
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 3.4e-06 54.7 59 47.5
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 3.4e-06 54.7 51 62.7
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.4e-06 54.7 62 51.6
Cc11_g09680 Coffea canephora HOM05D008114 ORTHO05D010089 4.5e-06 54.3 65 43.1
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 4.5e-06 54.3 59 45.8
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.5e-06 54.3 69 46.4
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.7e-06 53.5 74 44.6
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 7.7e-06 53.5 49 57.1
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 7.7e-06 53.5 51 52.9


User provided reference genes

Program Settings