Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 4.4e-112 408.3 260 100.0
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 3.0e-60 236.1 293 64.8
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 1.7e-58 230.3 295 64.7
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 6.9e-57 224.9 294 60.9
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 2.0e-56 223.4 294 62.9
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 3.4e-56 222.6 305 63.0
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 7.7e-56 221.5 295 61.4
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 1.0e-55 221.1 300 63.3
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 2.2e-55 219.9 295 62.7
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 8.5e-55 218.0 303 61.4
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 1.9e-54 216.9 301 62.5
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 1.9e-54 216.9 301 62.5
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 1.9e-54 216.9 301 62.5
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 2.5e-54 216.5 299 61.9
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 5.5e-54 215.3 295 62.4
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 7.2e-54 214.9 295 62.4
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 1.2e-53 214.2 299 61.2
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 1.5e-46 190.7 295 59.3
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.7e-40 169.9 300 55.7
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.7e-40 169.9 300 55.7
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.7e-40 169.9 300 55.7
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.2e-39 166.8 274 58.0
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 2.5e-38 163.3 245 55.1
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 4.2e-38 162.5 247 54.7
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 7.2e-30 135.2 273 48.0
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 1.8e-28 130.6 297 45.1
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.8e-26 123.2 300 51.0
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 3.7e-26 122.9 294 49.7
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 4.9e-26 122.5 297 44.8
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 8.3e-26 121.7 303 46.2
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.4e-25 120.9 290 45.2
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.8e-25 120.6 300 50.7
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 4.1e-25 119.4 284 45.8
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 5.4e-25 119.0 300 51.0
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.2e-24 117.9 297 43.4
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.2e-24 117.9 297 43.4
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 1.6e-24 117.5 285 40.0
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 3.5e-24 116.3 296 50.0
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.5e-24 115.9 297 43.1
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 4.5e-24 115.9 272 43.0
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 4.5e-24 115.9 302 47.7
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 5.9e-24 115.5 294 45.6
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 7.8e-24 115.2 270 45.9
C06p37150 Brassica napus HOM05D004533 ORTHO05D005347 1.7e-23 114.0 231 49.8
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 2.3e-23 113.6 305 44.3
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.9e-23 113.2 294 44.2
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 3.8e-23 112.8 308 46.4
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 6.6e-23 112.1 257 36.2
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 8.6e-23 111.7 308 45.8
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.5e-22 110.9 294 35.4
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.5e-22 110.9 294 44.9
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 1.5e-22 110.9 304 42.1
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 3.3e-22 109.8 308 40.6
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 4.3e-22 109.4 270 45.2
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 7.3e-22 108.6 322 32.0
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 7.3e-22 108.6 315 43.8
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 9.5e-22 108.2 300 41.0
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 1.2e-21 107.8 280 44.3
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 2.1e-21 107.1 306 48.7
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.7e-21 105.9 269 47.2
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.7e-21 105.9 269 47.2
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 4.7e-21 105.9 277 39.0
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.3e-20 103.6 261 51.3
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 4.0e-20 102.8 305 46.9
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 5.2e-20 102.4 264 45.8
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 8.9e-20 101.7 301 49.5
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 8.9e-20 101.7 321 31.8
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.2e-19 101.3 318 39.3
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 1.2e-19 101.3 297 49.5
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.2e-19 101.3 307 48.5
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.2e-19 101.3 297 49.5
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.5e-19 100.9 303 48.5
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.5e-19 100.9 306 34.0
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 2.0e-19 100.5 304 42.4
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.0e-19 100.5 262 37.4
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.0e-19 100.5 260 45.4
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.4e-19 99.8 297 48.5
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 4.4e-19 99.4 296 44.9
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 4.4e-19 99.4 271 44.6
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 5.8e-19 99.0 304 47.7
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 7.5e-19 98.6 308 30.5
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 7.5e-19 98.6 272 34.6
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 1.3e-18 97.8 293 43.7
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.7e-18 97.4 310 45.5
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.7e-18 97.4 310 32.3
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 1.7e-18 97.4 297 36.7
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 2.2e-18 97.1 262 37.8
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.9e-18 96.7 283 42.4
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 4.9e-18 95.9 303 48.2
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 6.4e-18 95.5 304 31.6
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 8.3e-18 95.1 261 35.6
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.4e-17 94.4 312 30.8
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.8e-17 94.0 263 45.6
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.8e-17 94.0 279 47.7
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 2.4e-17 93.6 267 33.0
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 3.2e-17 93.2 210 38.1
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 3.2e-17 93.2 279 40.5
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 3.2e-17 93.2 292 47.6
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 7.0e-17 92.0 267 34.1
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 9.2e-17 91.7 310 28.4
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.2e-16 91.3 332 42.5
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.7e-16 90.1 315 31.4
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 4.6e-16 89.4 285 41.8
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 7.8e-16 88.6 260 43.5
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 1.0e-15 88.2 315 41.3
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 2.3e-15 87.0 268 32.8
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 3.0e-15 86.7 332 42.2
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 3.0e-15 86.7 260 32.7
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 3.9e-15 86.3 273 40.7
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 5.0e-15 85.9 281 37.7
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 5.0e-15 85.9 281 37.7
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 6.6e-15 85.5 301 35.9
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.5e-14 84.3 294 40.8
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 3.3e-14 83.2 295 48.8
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 3.3e-14 83.2 296 44.6
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 4.3e-14 82.8 273 41.0
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 9.5e-14 81.6 312 45.2
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.2e-13 81.3 272 41.9
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.6e-13 80.9 296 39.5
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 2.8e-13 80.1 207 56.0
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 3.6e-13 79.7 298 40.6
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 1.1e-12 78.2 285 37.5
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 2.0e-11 73.9 306 36.6
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 2.0e-11 73.9 289 34.3
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 9.8e-11 71.6 303 28.7
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 1.3e-10 71.2 333 36.3
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 1.3e-10 71.2 351 37.0
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.9e-10 70.1 263 40.3
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 2.9e-10 70.1 314 38.2
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 6.4e-10 68.9 151 37.7
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 8.3e-10 68.6 107 43.0
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 5.4e-09 65.9 141 41.8
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 7.0e-09 65.5 176 47.2
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 2.1e-08 63.9 330 32.7
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.7e-08 63.5 212 43.9
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 2.7e-08 63.5 297 30.6
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 1.7e-07 60.8 271 30.6
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 3.9e-07 59.7 254 44.1
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 3.9e-07 59.7 273 44.3
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 6.6e-07 58.9 279 38.0
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.1e-06 58.2 188 47.9
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.5e-06 57.0 332 32.2


User provided reference genes

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