Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 4.3e-190 667.9 359 100.0
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 3.1e-124 449.1 357 65.3
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 5.0e-122 441.8 361 68.4
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 1.4e-119 433.7 362 64.4
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 1.4e-119 433.7 358 64.2
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 5.7e-118 428.3 361 62.6
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 6.3e-117 424.9 359 63.5
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 2.9e-114 416.0 359 62.4
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 5.0e-114 415.2 358 62.3
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 8.5e-114 414.5 359 62.1
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 5.2e-111 405.2 358 61.5
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 4.8e-109 398.7 331 62.5
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 6.8e-95 351.7 362 58.0
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 2.4e-92 343.2 361 56.8
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 6.6e-90 335.1 364 56.9
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 1.5e-86 323.9 365 53.7
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 2.0e-86 323.6 360 55.0
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.0e-74 284.6 367 50.7
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 8.4e-45 185.3 404 38.9
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 2.3e-42 177.2 154 61.7
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.1e-41 174.9 404 35.1
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.1e-41 174.9 436 33.9
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 1.5e-41 174.5 404 34.4
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 1.9e-41 174.1 407 35.6
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 5.7e-41 172.6 420 34.5
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 7.4e-41 172.2 163 57.1
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.6e-40 171.0 428 34.8
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 2.1e-40 170.6 146 61.6
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 3.7e-40 169.9 397 38.8
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 6.2e-40 169.1 380 40.3
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 6.2e-40 169.1 418 34.0
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 8.2e-40 168.7 411 33.8
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.8e-39 167.5 361 36.6
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 1.8e-39 167.5 325 38.2
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 2.4e-39 167.2 267 40.1
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.1e-39 166.8 403 34.2
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 4.0e-39 166.4 423 36.9
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 4.0e-39 166.4 420 32.9
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 9.0e-39 165.2 352 42.9
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 9.0e-39 165.2 354 41.5
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.5e-38 164.5 436 33.9
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.5e-38 164.5 423 34.3
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.5e-38 164.5 353 38.5
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 2.6e-38 163.7 411 35.5
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.4e-38 163.3 362 36.2
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 3.4e-38 163.3 410 33.4
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 1.0e-37 161.8 315 41.9
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 1.0e-37 161.8 407 34.2
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.0e-37 161.8 421 34.0
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.8e-37 159.8 423 33.1
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 6.5e-37 159.1 443 33.4
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.4e-36 157.9 389 35.5
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 1.4e-36 157.9 362 34.5
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.9e-36 157.5 423 33.3
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 3.2e-36 156.8 414 33.3
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 3.2e-36 156.8 387 34.6
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 3.2e-36 156.8 393 33.8
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 4.2e-36 156.4 417 33.8
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 5.5e-36 156.0 354 35.3
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 2.1e-35 154.1 463 34.3
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 2.7e-35 153.7 367 34.3
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 4.6e-35 152.9 338 34.9
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 1.3e-34 151.4 304 38.5
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 1.5e-33 147.9 305 36.1
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.9e-33 147.5 334 36.2
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.3e-33 146.7 290 38.3
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 5.7e-33 146.0 379 34.8
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 7.4e-33 145.6 306 38.2
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 7.4e-33 145.6 353 33.7
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.6e-32 144.4 266 41.4
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 3.7e-32 143.3 407 31.2
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 1.1e-31 141.7 350 35.7
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.8e-31 141.0 415 34.5
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 1.8e-31 141.0 423 32.6
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 4.1e-31 139.8 357 34.2
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 4.1e-31 139.8 366 33.1
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.3e-31 139.4 278 38.1
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 6.9e-31 139.0 402 30.3
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 6.9e-31 139.0 359 33.1
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 1.2e-30 138.3 260 41.5
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.5e-30 137.9 383 32.1
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 1.5e-30 137.9 349 34.1
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 2.0e-30 137.5 373 33.0
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 3.4e-30 136.7 331 35.0
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 4.5e-30 136.3 331 35.0
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 7.7e-30 135.6 392 31.6
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 7.7e-30 135.6 253 41.5
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.0e-29 135.2 317 34.4
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.0e-29 135.2 362 34.3
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 3.8e-29 133.3 276 38.8
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 3.8e-29 133.3 310 35.2
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 5.0e-29 132.9 310 34.2
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 6.5e-29 132.5 294 36.7
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 6.5e-29 132.5 310 34.8
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 6.5e-29 132.5 329 33.4
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 6.5e-29 132.5 438 31.5
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 8.5e-29 132.1 352 34.1
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 1.1e-28 131.7 357 32.8
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 5.5e-28 129.4 336 35.7
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 2.7e-27 127.1 107 61.7
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 2.7e-27 127.1 107 61.7
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 4.6e-27 126.3 329 32.8
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 6.1e-27 125.9 327 34.3
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 1.0e-26 125.2 333 33.9
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 1.4e-26 124.8 335 32.5
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 3.9e-26 123.2 235 38.7
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 5.1e-26 122.9 246 35.4
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 6.7e-26 122.5 339 31.3
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 1.5e-25 121.3 302 34.8
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.5e-25 120.6 240 39.6
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 2.5e-25 120.6 277 38.6
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 5.7e-25 119.4 394 31.2
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 1.7e-24 117.9 364 32.7
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.1e-23 115.2 269 33.8
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 1.4e-23 114.8 263 35.4
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 2.4e-23 114.0 146 48.6
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.2e-22 111.7 368 31.2
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 2.6e-22 110.5 258 36.0
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 4.5e-22 109.8 295 35.6
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 2.2e-21 107.5 317 32.5
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 3.8e-21 106.7 303 33.7
CARHR240540 Cardamine hirsuta HOM05D005141 ORTHO05D006250 3.6e-19 100.1 78 64.1
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 3.6e-19 100.1 295 33.2
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 1.8e-18 97.8 307 31.6
BolC9t58511H Brassica oleracea HOM05D005141 ORTHO05D006250 7.4e-17 92.4 76 61.8
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 7.4e-17 92.4 207 37.7
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 1.1e-15 88.6 122 45.9
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.4e-15 88.2 255 31.0
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.2e-14 85.1 143 40.6
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 2.6e-14 84.0 116 46.6
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.3e-13 81.6 137 43.8
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.3e-13 81.6 133 43.6
CARHR240550 Cardamine hirsuta HOM05D005141 ORTHO05D006250 3.8e-13 80.1 60 68.3
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 3.8e-13 80.1 144 41.0
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 6.5e-13 79.3 126 39.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 7.2e-12 75.9 184 34.8
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.8e-10 71.2 240 36.7
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.1e-09 68.6 49 67.3
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 5.7e-09 66.2 114 40.4
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 3.5e-06 57.0 50 52.0


User provided reference genes

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