Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 2.4e-260 901.7 484 100.0
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 5.9e-227 790.8 484 81.8
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.5e-225 786.2 487 81.5
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 7.2e-225 783.9 480 81.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.1e-224 782.3 480 85.2
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.7e-224 781.2 480 81.9
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 3.0e-223 778.5 482 80.5
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.5e-222 776.2 481 81.5
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.5e-222 776.2 481 81.5
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.5e-222 776.2 484 88.2
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.4e-222 775.0 484 81.2
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 3.4e-222 775.0 485 80.8
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 5.7e-222 774.2 481 86.3
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 9.8e-222 773.5 484 87.8
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 3.7e-221 771.5 480 87.5
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 4.8e-221 771.2 481 86.3
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 6.3e-221 770.8 481 84.0
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 2.0e-211 739.2 485 76.3
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 5.9e-211 737.6 486 75.7
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 5.9e-211 737.6 393 88.8
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.0e-210 736.9 489 75.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.0e-210 736.9 485 76.1
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.7e-210 736.1 486 76.1
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 2.9e-210 735.3 393 88.8
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 2.9e-210 735.3 487 75.4
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.9e-210 735.3 393 88.5
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.9e-210 735.3 484 75.4
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.8e-210 734.9 486 75.7
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 5.0e-210 734.6 393 88.3
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.1e-209 733.4 486 76.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.5e-209 733.0 486 76.3
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.5e-209 733.0 489 75.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 4.3e-209 731.5 484 75.8
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 4.3e-209 731.5 485 75.5
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.6e-209 731.1 486 76.5
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.6e-209 731.1 486 76.5
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 7.3e-209 730.7 393 87.8
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.3e-209 730.7 393 88.3
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 9.5e-209 730.3 393 88.8
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 9.5e-209 730.3 393 87.8
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.2e-208 729.9 393 86.8
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 2.1e-208 729.2 485 75.7
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 3.6e-208 728.4 392 88.0
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 6.1e-208 727.6 393 87.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 6.1e-208 727.6 393 87.8
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 8.0e-208 727.2 485 75.1
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 8.0e-208 727.2 393 87.0
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.0e-207 726.9 393 87.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.0e-207 726.9 393 87.5
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.0e-207 726.9 389 88.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.0e-207 726.9 389 88.2
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.4e-207 726.5 484 75.0
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.4e-207 726.5 392 87.5
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.4e-207 726.5 489 75.9
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-207 726.1 392 87.8
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.8e-207 726.1 393 87.5
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 1.8e-207 726.1 393 87.0
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 2.3e-207 725.7 393 87.8
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 2.3e-207 725.7 486 74.9
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.3e-207 725.7 393 87.5
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 3.0e-207 725.3 393 87.5
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 4.0e-207 724.9 486 74.7
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 5.2e-207 724.5 393 87.8
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 6.8e-207 724.2 486 74.5
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 6.8e-207 724.2 393 86.5
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 8.9e-207 723.8 393 86.5
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.2e-206 723.4 393 87.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-206 723.4 393 87.0
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-206 723.4 393 87.3
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-206 723.4 393 87.0
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.5e-206 723.0 389 87.7
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 2.0e-206 722.6 393 87.3
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.6e-206 722.2 389 86.9
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.4e-206 721.8 393 87.0
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 3.4e-206 721.8 484 74.6
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 4.4e-206 721.5 393 87.3
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 5.7e-206 721.1 393 86.3
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 5.7e-206 721.1 393 87.5
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 5.7e-206 721.1 389 87.4
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.5e-206 720.7 393 87.3
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 9.8e-206 720.3 393 86.8
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.2e-205 719.2 393 86.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 2.9e-205 718.8 393 85.0
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 3.7e-205 718.4 393 86.5
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 6.4e-205 717.6 389 86.6
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 3.2e-204 715.3 487 74.3
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 4.1e-204 714.9 517 71.2
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 5.4e-204 714.5 389 86.4
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 7.0e-204 714.1 393 85.8
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 9.2e-204 713.8 389 85.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.6e-203 713.0 393 86.0
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.6e-203 713.0 389 86.1
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 2.0e-203 712.6 389 86.1
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 3.5e-203 711.8 393 85.8
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.5e-203 711.8 389 85.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 7.8e-203 710.7 481 81.5
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 2.3e-202 709.1 486 73.5
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.3e-202 709.1 485 73.4
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.1e-199 698.7 390 84.6
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 8.1e-192 674.1 391 79.5
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 4.0e-191 671.8 399 78.9
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.2e-190 670.2 353 89.0
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 6.0e-187 657.9 387 79.3
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 6.0e-187 657.9 389 78.7
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 1.7e-186 656.4 486 69.1
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 6.6e-186 654.4 390 78.2
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.4e-172 610.1 386 73.6
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.7e-165 586.6 378 70.1
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 4.2e-164 582.0 391 67.8
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.4e-164 581.6 340 82.4
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.7e-160 568.9 387 73.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 8.1e-160 567.8 389 72.2
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 4.0e-151 538.9 289 88.9
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 3.8e-149 532.3 289 87.5
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.5e-134 483.8 263 84.4
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.8e-130 470.3 251 84.9
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.5e-105 385.2 237 78.9
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.4e-95 353.6 188 84.6
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 6.6e-77 292.4 170 80.0
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.6e-62 243.0 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 6.9e-58 229.2 130 82.3
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-55 221.9 130 80.8
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 7.1e-55 219.2 136 75.7
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.9e-47 194.5 140 72.1
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.7e-32 144.8 93 74.2
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 2.7e-30 137.5 105 64.8
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.5e-25 121.7 67 85.1
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 5.1e-13 80.1 59 64.4
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.2e-07 60.8 128 34.4
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 9.4e-07 59.3 125 30.4
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.2e-06 58.9 153 29.4
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 4.7e-06 57.0 125 28.0


User provided reference genes

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