Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 5.0e-73 277.7 145 100.0
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 2.5e-32 142.5 179 54.2
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 2.8e-31 139.0 181 53.6
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 2.8e-31 139.0 181 53.6
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 4.8e-31 138.3 181 54.1
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 2.4e-30 136.0 181 53.6
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 9.0e-30 134.0 176 54.0
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 9.0e-30 134.0 182 52.7
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 1.2e-29 133.7 176 54.0
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 1.2e-29 133.7 176 54.0
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 1.4e-27 126.7 181 52.5
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 1.9e-27 126.3 182 51.1
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 3.2e-27 125.6 176 52.8
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 3.2e-27 125.6 176 52.8
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 3.2e-27 125.6 184 52.7
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 9.3e-27 124.0 176 52.8
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 1.8e-25 119.8 182 49.5
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 1.8e-25 119.8 182 49.5
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 3.0e-25 119.0 182 49.5
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 3.0e-25 119.0 182 49.5
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.6e-23 113.2 132 56.1
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 4.8e-23 111.7 178 48.3
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 5.3e-22 108.2 177 49.2
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 3.4e-21 105.5 179 48.0
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 3.4e-21 105.5 178 49.4
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 4.5e-21 105.1 118 57.6
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 1.0e-20 104.0 176 48.9
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 1.0e-20 104.0 176 48.9
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 1.0e-20 104.0 176 48.9
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 1.3e-20 103.6 173 48.0
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 1.3e-20 103.6 173 48.0
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 2.2e-20 102.8 119 59.7
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 5.5e-19 98.2 126 54.8
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 5.5e-19 98.2 126 54.8
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 2.7e-18 95.9 126 54.0
BNapus_Darmor_BZH_scaffold_256p00010 Brassica napus HOM05D005097 ORTHO05D006186 2.7e-18 95.9 151 49.7
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 2.7e-18 95.9 126 54.0
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 4.6e-18 95.1 85 64.7
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 4.6e-18 95.1 180 44.4
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 4.6e-18 95.1 81 69.1
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.8e-17 93.2 175 45.7
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 8.7e-17 90.9 133 50.4
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.9e-16 89.7 72 69.4
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 1.6e-15 86.7 146 46.6
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 2.2e-15 86.3 121 49.6
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 4.8e-15 85.1 73 60.3
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 3.1e-14 82.4 81 58.0
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 9.0e-14 80.9 65 64.6
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.2e-13 80.5 175 41.1
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 1.5e-13 80.1 128 46.9
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 2.6e-13 79.3 83 54.2
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 2.6e-13 79.3 198 37.4
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 3.4e-13 79.0 67 62.7
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 3.4e-13 79.0 68 63.2
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 4.5e-13 78.6 141 40.4
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 4.5e-13 78.6 145 39.3
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 1.0e-12 77.4 83 51.8
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.0e-12 77.4 169 40.8
BcaC08g45865 Brassica carinata HOM05D005097 ORTHO05D006186 1.7e-12 76.6 130 46.2
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 1.7e-12 76.6 76 53.9
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 2.2e-12 76.3 157 42.0
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 2.9e-12 75.9 189 37.6
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 2.9e-12 75.9 86 52.3
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 2.9e-12 75.9 171 36.3
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 3.8e-12 75.5 171 35.7
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 6.5e-12 74.7 132 40.9
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 6.5e-12 74.7 72 61.1
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 8.5e-12 74.3 81 46.9
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 1.1e-11 73.9 129 43.4
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 1.1e-11 73.9 121 41.3
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.4e-11 73.6 147 41.5
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 1.4e-11 73.6 135 40.7
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 1.4e-11 73.6 152 39.5
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.9e-11 73.2 178 38.2
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 1.9e-11 73.2 155 38.7
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.9e-11 73.2 68 57.4
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.9e-11 73.2 159 37.7
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.9e-11 73.2 159 37.7
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 2.5e-11 72.8 137 40.1
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 2.5e-11 72.8 140 37.9
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.2e-11 72.4 159 37.7
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 3.2e-11 72.4 66 59.1
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 3.2e-11 72.4 174 37.9
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 4.2e-11 72.0 129 38.8
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 4.2e-11 72.0 188 37.8
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 4.2e-11 72.0 72 54.2
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 5.5e-11 71.6 75 57.3
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 7.2e-11 71.2 69 56.5
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 7.2e-11 71.2 183 34.4
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.2e-10 70.5 85 47.1
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 1.2e-10 70.5 183 36.6
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.2e-10 70.5 69 55.1
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 1.6e-10 70.1 126 42.9
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.6e-10 70.1 67 58.2
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.6e-10 70.1 173 37.6
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 1.6e-10 70.1 67 58.2
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 2.1e-10 69.7 146 37.0
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 2.1e-10 69.7 164 39.6
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 2.7e-10 69.3 78 52.6
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 3.6e-10 68.9 135 39.3
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.6e-10 68.9 173 37.6
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 6.1e-10 68.2 88 50.0
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 6.1e-10 68.2 67 59.7
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 6.1e-10 68.2 182 33.0
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 6.1e-10 68.2 138 38.4
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 7.9e-10 67.8 149 38.9
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 7.9e-10 67.8 67 56.7
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 7.9e-10 67.8 73 50.7
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 1.0e-09 67.4 166 37.3
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.0e-09 67.4 148 36.5
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 1.4e-09 67.0 149 37.6
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.8e-09 66.6 136 36.0
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 2.3e-09 66.2 85 43.5
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 2.3e-09 66.2 166 38.0
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.0e-09 65.9 148 36.5
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 3.0e-09 65.9 164 38.4
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 3.9e-09 65.5 134 38.1
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 3.9e-09 65.5 96 42.7
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 5.1e-09 65.1 156 37.8
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 8.8e-09 64.3 81 45.7
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 8.8e-09 64.3 133 39.1
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 8.8e-09 64.3 195 34.4
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 8.8e-09 64.3 72 50.0
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 1.5e-08 63.5 66 54.5
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 1.5e-08 63.5 153 34.0
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.0e-08 63.2 182 34.1
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 3.3e-08 62.4 143 35.0
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 4.3e-08 62.0 176 36.9
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 7.4e-08 61.2 151 33.8
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 9.7e-08 60.8 166 36.1
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 9.7e-08 60.8 171 35.7
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 1.3e-07 60.5 161 37.3
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.3e-07 60.5 161 39.1
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 2.2e-07 59.7 149 34.2
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 6.3e-07 58.2 88 46.6
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 8.2e-07 57.8 73 43.8
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 3.1e-06 55.8 176 34.7
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 3.1e-06 55.8 62 50.0


User provided reference genes

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