Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 6.1e-146 520.8 258 100.0
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 9.8e-104 380.6 262 74.0
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.3e-103 380.2 258 75.2
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 2.9e-103 379.0 258 74.8
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 2.9e-103 379.0 258 74.8
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 4.9e-103 378.3 262 73.7
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 6.4e-103 377.9 258 74.4
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 6.4e-103 377.9 258 74.4
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.4e-102 376.7 258 74.4
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.2e-102 375.6 263 74.1
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.5e-99 366.7 263 73.0
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 7.3e-99 364.4 262 71.4
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 7.5e-96 354.4 258 72.1
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 6.4e-79 298.1 244 63.5
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 8.1e-66 254.6 198 61.6
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-65 254.2 255 52.9
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.4e-65 253.8 198 61.6
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 1.4e-65 253.8 230 57.4
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-65 253.1 269 52.8
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.1e-65 252.7 250 52.4
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 4.0e-65 252.3 246 55.3
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.3e-65 251.9 269 52.4
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 6.9e-65 251.5 192 62.0
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 4.5e-64 248.8 278 50.0
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 4.5e-64 248.8 233 56.7
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 4.5e-64 248.8 197 62.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 5.8e-64 248.4 198 61.1
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 7.6e-64 248.1 237 55.7
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 7.6e-64 248.1 196 61.7
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 1.3e-63 247.3 194 62.9
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.7e-63 246.9 256 52.7
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.2e-63 246.5 190 61.1
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.8e-63 245.7 195 61.5
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 4.9e-63 245.4 198 61.1
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 8.4e-63 244.6 232 51.3
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.4e-63 244.6 198 61.6
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.9e-62 243.4 229 54.6
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.4e-62 243.0 192 60.4
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.2e-62 242.3 256 52.3
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.2e-62 242.3 256 52.3
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 5.5e-62 241.9 234 53.4
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 7.1e-62 241.5 237 54.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.6e-61 240.4 234 53.4
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.7e-61 239.6 251 50.6
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 2.7e-61 239.6 193 59.6
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 3.5e-61 239.2 201 57.7
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 7.9e-61 238.0 194 61.9
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.0e-60 237.7 207 56.0
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.0e-60 237.7 194 61.3
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.0e-60 237.7 195 60.0
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.3e-60 237.3 196 59.2
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.3e-60 237.3 198 60.1
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.8e-60 236.9 247 51.8
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.3e-60 236.5 221 55.2
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.3e-60 236.5 237 53.6
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 3.0e-60 236.1 216 56.9
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 3.0e-60 236.1 193 60.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 6.7e-60 235.0 195 61.5
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 6.7e-60 235.0 234 53.8
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 6.7e-60 235.0 198 60.1
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 6.7e-60 235.0 239 53.1
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.1e-59 234.2 237 52.3
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.1e-59 234.2 228 52.6
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.5e-59 233.8 217 54.4
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.3e-59 232.3 202 56.4
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.6e-59 231.9 246 50.4
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 9.6e-59 231.1 221 53.4
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 9.6e-59 231.1 198 58.6
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 2.1e-58 229.9 216 54.6
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 2.8e-58 229.6 187 60.4
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 4.8e-58 228.8 192 57.3
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 6.2e-58 228.4 191 57.6
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 8.1e-58 228.0 192 58.3
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.4e-57 226.5 203 58.6
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 6.9e-57 224.9 200 55.5
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 6.9e-57 224.9 200 57.5
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 6.9e-57 224.9 242 50.0
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.2e-56 224.2 246 48.8
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 3.4e-56 222.6 196 55.1
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 4.5e-56 222.2 190 56.8
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.3e-55 220.7 270 47.8
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.7e-55 220.3 264 45.1
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.9e-55 219.5 232 50.4
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 4.9e-55 218.8 195 53.8
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 8.4e-55 218.0 231 50.6
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 8.4e-55 218.0 192 56.2
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.2e-53 214.2 227 51.5
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 4.6e-53 212.2 157 63.7
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 5.7e-51 205.3 194 51.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.6e-51 204.5 197 53.3
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 3.7e-50 202.6 213 50.7
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 3.1e-49 199.5 195 50.8
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.1e-49 199.1 197 51.8
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 1.1e-46 191.0 221 48.9
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.3e-44 184.1 199 50.3
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.3e-44 184.1 145 62.8
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.5e-43 179.9 217 43.8
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.3e-43 179.5 222 44.6
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 9.7e-43 177.9 147 59.2
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.6e-42 177.2 229 41.5
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 1.0e-36 157.9 187 42.8
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 6.3e-34 148.7 199 46.7
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 2.0e-32 143.7 145 51.7
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.8e-31 139.4 132 52.3
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 5.0e-31 139.0 121 57.0
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 8.5e-31 138.3 127 56.7
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.9e-30 137.1 139 51.1
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.5e-30 136.7 193 39.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.6e-29 134.0 144 49.3
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.9e-29 131.7 118 55.1
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 5.7e-27 125.6 180 42.8
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 2.4e-25 120.2 140 45.0
BcaC08g45742 Brassica carinata HOM05D006270 ORTHO05D007755 2.9e-23 113.2 109 59.6
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 7.2e-22 108.6 159 39.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 7.2e-22 108.6 225 31.6
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.6e-21 106.3 109 48.6
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-19 100.5 123 45.5
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 2.0e-19 100.5 216 33.3
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.4e-19 99.4 133 42.9
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 2.8e-18 96.7 69 63.8
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.7e-15 87.4 65 63.1
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.5e-15 85.5 95 46.3
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.4e-09 67.8 46 63.0
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.2e-06 56.6 83 37.3
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.2e-06 56.6 83 37.3
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 9.4e-06 55.1 82 41.5


User provided reference genes

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