Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G10230 Aethionema arabicum HOM05D007477 ORTHO05D009428 2.3e-105 385.6 192 100.0
A02p16850 Brassica napus HOM05D007477 ORTHO05D009428 1.8e-73 279.6 192 71.4
BcaC03g15231 Brassica carinata HOM05D007477 ORTHO05D009428 3.0e-73 278.9 193 71.5
C02p28170 Brassica napus HOM05D007477 ORTHO05D009428 3.0e-73 278.9 193 71.5
BolC2t08861H Brassica oleracea HOM05D007477 ORTHO05D009428 3.0e-73 278.9 193 71.5
BraA02t06739Z Brassica rapa HOM05D007477 ORTHO05D009428 1.5e-72 276.6 192 70.8
BraA07t31278Z Brassica rapa HOM05D007477 ORTHO05D009428 1.9e-72 276.2 195 70.3
BcaC08g46513 Brassica carinata HOM05D007477 ORTHO05D009428 2.5e-72 275.8 195 70.3
A07p37160 Brassica napus HOM05D007477 ORTHO05D009428 9.6e-72 273.9 195 69.7
C06p44830 Brassica napus HOM05D007477 ORTHO05D009428 2.8e-71 272.3 195 69.7
BcaB05g24610 Brassica carinata HOM05D007477 ORTHO05D009428 4.8e-71 271.6 192 69.3
Thhalv10019160m.g Eutrema salsugineum HOM05D007477 ORTHO05D009428 6.2e-71 271.2 198 69.2
Carub.0002s1750 Capsella rubella HOM05D007477 ORTHO05D009428 4.0e-70 268.5 194 69.1
BolC6t39542H Brassica oleracea HOM05D007477 ORTHO05D009428 5.3e-70 268.1 195 69.2
Sp5g25940 Schrenkiella parvula HOM05D007477 ORTHO05D009428 9.0e-70 267.3 193 68.4
CARHR064020 Cardamine hirsuta HOM05D007477 ORTHO05D009428 1.5e-69 266.5 195 69.7
AL2G30200 Arabidopsis lyrata HOM05D007477 ORTHO05D009428 2.6e-69 265.8 193 67.9
AT1G70760 Arabidopsis thaliana HOM05D007477 ORTHO05D009428 7.1e-67 257.7 193 66.3
THA.LOC104823000 Tarenaya hassleriana HOM05D007477 ORTHO05D009428 4.2e-59 231.9 188 60.1
Duzib251G0266 Durio zibethinus HOM05D007477 ORTHO05D009428 5.1e-57 224.9 180 60.6
Thecc.02G287400 Theobroma cacao HOM05D007477 ORTHO05D009428 6.3e-55 218.0 150 66.7
Dinv28044 Davidia involucrata HOM05D007477 ORTHO05D009428 3.4e-53 212.2 188 57.4
Gohir.A03G118700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 1.3e-52 210.3 193 56.0
Cpa.g.sc1084.2 Carica papaya HOM05D007477 ORTHO05D009428 3.8e-52 208.8 192 57.3
Gohir.D02G141700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 6.5e-52 208.0 192 55.7
Cfa014979 Carpinus fangiana HOM05D007477 ORTHO05D009428 3.2e-51 205.7 174 57.5
GSVIVG01011707001 Vitis vinifera HOM05D007477 ORTHO05D009428 4.7e-50 201.8 188 53.7
QL03p033890 Quercus lobata HOM05D007477 ORTHO05D009428 1.0e-49 200.7 133 70.7
Prupe.1G330000 Prunus persica HOM05D007477 ORTHO05D009428 1.4e-49 200.3 137 67.2
Manes.15G131100 Manihot esculenta HOM05D007477 ORTHO05D009428 3.0e-49 199.1 169 58.0
Ciclev10016822m.g Citrus clementina HOM05D007477 ORTHO05D009428 1.5e-48 196.8 193 56.0
PGR004G1414 Punica granatum HOM05D007477 ORTHO05D009428 1.5e-48 196.8 134 69.4
CiPaw.06G048300 Carya illinoinensis HOM05D007477 ORTHO05D009428 2.2e-47 193.0 189 51.3
Sed0009759 Sechium edule HOM05D007477 ORTHO05D009428 2.2e-47 193.0 184 56.5
Actinidia12373 Actinidia chinensis HOM05D007477 ORTHO05D009428 8.2e-47 191.0 137 66.4
Eucgr.G02161 Eucalyptus grandis HOM05D007477 ORTHO05D009428 1.1e-46 190.7 150 60.7
RcHm_v2.0_Chr4g0443591 Rosa chinensis HOM05D007477 ORTHO05D009428 1.1e-46 190.7 193 53.9
TWI74G0372 Tripterygium wilfordii HOM05D007477 ORTHO05D009428 9.1e-46 187.6 127 65.4
DCAR_023590 Daucus carota HOM05D007477 ORTHO05D009428 1.5e-45 186.8 189 53.4
Lalb_Chr07g0187731 Lupinus albus HOM05D007477 ORTHO05D009428 2.6e-45 186.0 141 59.6
Lj4g0016169 Lotus japonicus HOM05D007477 ORTHO05D009428 3.4e-45 185.7 137 62.8
MELO3C005297.2 Cucumis melo HOM05D007477 ORTHO05D009428 4.5e-45 185.3 136 66.9
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 5.9e-45 184.9 132 68.9
Gorai.005G159500 Gossypium raimondii HOM05D007477 ORTHO05D009428 2.2e-44 183.0 181 53.0
HanXRQChr12g0363541 Helianthus annuus HOM05D007477 ORTHO05D009428 3.8e-44 182.2 135 65.2
Lj3A866T67 Lonicera japonica HOM05D007477 ORTHO05D009428 5.0e-44 181.8 138 62.3
Actinidia36649 Actinidia chinensis HOM05D007477 ORTHO05D009428 6.5e-44 181.4 137 65.7
CANSAT01G0728 Cannabis sativa HOM05D007477 ORTHO05D009428 1.1e-43 180.6 188 51.6
ECA233G5235 Erigeron canadensis HOM05D007477 ORTHO05D009428 5.5e-43 178.3 138 63.0
Lsat_1_v5_gn_8_44241 Lactuca sativa HOM05D007477 ORTHO05D009428 9.4e-43 177.6 139 61.9
arahy.Tifrunner.gnm1.ann1.4G9RAC Arachis hypogaea HOM05D007477 ORTHO05D009428 1.2e-42 177.2 167 56.3
arahy.Tifrunner.gnm1.ann1.KUTA9A Arachis hypogaea HOM05D007477 ORTHO05D009428 1.2e-42 177.2 167 56.3
Atru.chr11.654 Acer truncatum HOM05D007477 ORTHO05D009428 2.7e-42 176.0 192 49.0
Nitab4.5_0003022g0050 Nicotiana tabacum HOM05D007477 ORTHO05D009428 1.4e-41 173.7 188 52.1
Nitab4.5_0002473g0010 Nicotiana tabacum HOM05D007477 ORTHO05D009428 1.8e-41 173.3 188 52.1
AUR62014194 Chenopodium quinoa HOM05D007477 ORTHO05D009428 2.3e-41 172.9 127 64.6
FAN07G0335 Fragaria x ananassa HOM05D007477 ORTHO05D009428 5.2e-41 171.8 128 64.1
Solyc05g026550.3 Solanum lycopersicum HOM05D007477 ORTHO05D009428 5.2e-41 171.8 133 63.2
PGSC0003DMG400015900 Solanum tuberosum HOM05D007477 ORTHO05D009428 8.8e-41 171.0 173 52.0
Peaxi162Scf00376g00125 Petunia axillaris HOM05D007477 ORTHO05D009428 1.1e-40 170.6 191 51.8
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 1.1e-40 170.6 159 56.0
unitig_26.g9564 Utricularia gibba HOM05D000544 ORTHO05D009428 2.6e-40 169.5 172 52.9
MBI12_g05373_MAGBIO Magnolia biondii HOM05D007477 ORTHO05D009428 3.3e-40 169.1 171 49.7
FAN17G0828 Fragaria x ananassa HOM05D007477 ORTHO05D009428 4.4e-40 168.7 133 60.9
FvH4_4g34090 Fragaria vesca HOM05D007477 ORTHO05D009428 1.3e-39 167.2 133 60.2
FAN12G2365 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.3e-39 167.2 133 60.2
Nn4g24250 Nelumbo nucifera HOM05D007477 ORTHO05D009428 1.3e-39 167.2 173 49.7
PSO478G2137 Papaver somniferum HOM05D007477 ORTHO05D009428 1.3e-39 167.2 173 50.3
Psat7g082600 Pisum sativum HOM05D007477 ORTHO05D009428 1.3e-39 167.2 199 49.2
SalBow8G0293 Salvia bowleyana HOM05D007477 ORTHO05D009428 1.3e-39 167.2 127 63.0
Glyma.05G139800 Glycine max HOM05D007477 ORTHO05D009428 2.2e-39 166.4 161 52.8
Phvul.002G183200 Phaseolus vulgaris HOM05D007477 ORTHO05D009428 2.8e-39 166.0 187 48.7
Cc11_g08270 Coffea canephora HOM05D007477 ORTHO05D009428 1.1e-38 164.1 128 63.3
MSTRG.7617 Avicennia marina HOM05D007477 ORTHO05D009428 1.4e-38 163.7 141 58.2
Ca_11592_v3 Cicer arietinum L. HOM05D007477 ORTHO05D009428 1.8e-38 163.3 196 49.5
VMungo0251G0485 Vigna mungo HOM05D007477 ORTHO05D009428 3.1e-38 162.5 129 59.7
Potri.010G110400 Populus trichocarpa HOM05D007477 ORTHO05D009428 7.0e-38 161.4 192 45.3
Migut.L00398 Erythranthe guttata HOM05D007477 ORTHO05D009428 1.7e-36 156.8 148 52.7
CAN.G439.27 Capsicum annuum HOM05D007477 ORTHO05D009428 6.5e-36 154.8 131 59.5
CDE05G1013 Ceratophyllum demersum HOM05D007477 ORTHO05D009428 1.5e-35 153.7 174 48.9
Aqoxy3G00052 Aquilegia oxysepala HOM05D007477 ORTHO05D009428 1.9e-35 153.3 164 51.8
Haze_10942 Corylus avellana HOM05D007477 ORTHO05D009428 7.2e-35 151.4 169 47.9
Rhsim09G0093900 Rhododendron simsii HOM05D007477 ORTHO05D009428 7.2e-35 151.4 184 48.4
vmacro10662 Vaccinium macrocarpon HOM05D007477 ORTHO05D009428 1.0e-33 147.5 184 47.8
ClCG01G006330 Citrullus lanatus HOM05D007477 ORTHO05D009428 8.8e-33 144.4 194 44.8
EL10Ac9g22714 Beta vulgaris HOM05D007477 ORTHO05D009428 1.4e-30 137.1 177 45.2
ATR0564G098 Amborella trichopoda HOM05D007477 ORTHO05D009428 4.1e-30 135.6 131 51.1
Ah.01g007630 Amaranthus hybridus HOM05D007477 ORTHO05D009428 3.8e-28 129.0 135 52.6
MD16G1022900 Malus domestica HOM05D007477 ORTHO05D009428 2.5e-27 126.3 139 48.9
Glyma.08G095100 Glycine max HOM05D007477 ORTHO05D009428 6.1e-26 121.7 131 49.6
Zm00001eb312390 Zea mays HOM05D007477 ORTHO05D009428 6.8e-25 118.2 167 38.3
Zm00001eb099410 Zea mays HOM05D007477 ORTHO05D009428 1.2e-24 117.5 103 51.5
MD13G1021900 Malus domestica HOM05D007477 ORTHO05D009428 1.6e-21 107.1 101 54.5
Os05g0348100 Oryza sativa ssp. japonica HOM05D007477 ORTHO05D009428 7.7e-21 104.8 70 62.9
SEGI_14142 Sequoiadendron giganteum HOM05D007477 ORTHO05D009428 1.8e-17 93.6 104 48.1
AUR62039526 Chenopodium quinoa HOM05D007477 ORTHO05D009428 3.7e-15 85.9 172 36.6
Mapoly0003s0200 Marchantia polymorpha HOM05D007477 ORTHO05D009428 1.2e-13 80.9 107 45.8
Pp3c24_18490 Physcomitrium patens HOM05D007477 ORTHO05D009428 1.6e-13 80.5 76 53.9
FAN22G0194 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.3e-12 77.4 133 35.3
COL.COLO4_13101 Corchorus olitorius HOM05D007477 ORTHO05D009428 6.6e-12 75.1 57 57.9
Sabra10G0080700 Salix brachista HOM05D007477 ORTHO05D009428 4.0e-09 65.9 111 35.1
TAR622G1153 Trochodendron aralioides HOM05D007477 ORTHO05D009428 5.2e-09 65.5 71 46.5
AagrBONN_evm.TU.Sc2ySwM_344.2533 Anthoceros agrestis HOM05D007477 ORTHO05D009428 8.3e-07 58.2 54 51.9
SEGI_21620 Sequoiadendron giganteum HOM05D002696 ORTHO05D009428 3.2e-06 56.2 81 42.0


User provided reference genes

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